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1700001D01Rik Gene Detail
Summary
  • Symbol
    1700001D01Rik
  • Name
    RIKEN cDNA 1700001D01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916529
    NCBI Gene: 69279
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:61734556-61741906 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    307 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916529
 lncRNA gene Chr8:61734556-61741906 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007330
 lincRNA gene Chr8:61196074-61203422 (-)
A/J MGP_AJ_G0007328
 lincRNA gene Chr8:58579285-58586622 (-)
AKR/J MGP_AKRJ_G0007299
 lincRNA gene Chr8:60263817-60273421 (-)
BALB/cJ MGP_BALBcJ_G0007306
 lincRNA gene Chr8:58833897-58841432 (-)
C3H/HeJ MGP_C3HHeJ_G0007249
 lincRNA gene Chr8:60933616-60944636 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007476
 lincRNA gene Chr8:63521522-63528874 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006673
 lincRNA gene Chr8:53828479-53835783 (-)
CAST/EiJ MGP_CASTEiJ_G0007151
 lincRNA gene Chr8:60348186-60355538 (-)
CBA/J MGP_CBAJ_G0007232
 lincRNA gene Chr8:65811624-65819119 (-)
DBA/2J MGP_DBA2J_G0007254
 lincRNA gene Chr8:58334655-58342546 (-)
FVB/NJ MGP_FVBNJ_G0007275
 lincRNA gene Chr8:57643185-57650856 (-)
LP/J MGP_LPJ_G0007335
 lincRNA gene Chr8:61155834-61168648 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007252
 lincRNA gene Chr8:67926586-67933923 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007478
 lincRNA gene Chr8:60526898-60536849 (-)
PWK/PhJ MGP_PWKPhJ_G0007093
 lincRNA gene Chr8:57641770-57649177 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007001
 lincRNA gene Chr8:59504735-59512075 (-)
WSB/EiJ MGP_WSBEiJ_G0007211
 lincRNA gene Chr8:60849917-60857328 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 69279 NCBI Gene Model | MGI Sequence Detail 7351 C57BL/6J ±  kb
transcript NR_045475 RefSeq | MGI Sequence Detail 565 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory