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1700008J07Rik Gene Detail
Summary
  • Symbol
    1700008J07Rik
  • Name
    RIKEN cDNA 1700008J07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916610
    NCBI Gene: 629159
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:127109610-127112041 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 69.56 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916610
 lncRNA gene Chr7:127109610-127112041 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004507
 antisense lncRNA gene Chr7:131862980-131865411 (-)
A/J MGP_AJ_G0004487
 antisense lncRNA gene Chr7:128362096-128364526 (-)
AKR/J MGP_AKRJ_G0004470
 antisense lncRNA gene Chr7:131663734-131666165 (-)
BALB/cJ MGP_BALBcJ_G0004472
 antisense lncRNA gene Chr7:128008411-128010842 (-)
C3H/HeJ MGP_C3HHeJ_G0004421
 antisense lncRNA gene Chr7:131567448-131569879 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004622
 antisense lncRNA gene Chr7:137009307-137011738 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004077
 antisense lncRNA gene Chr7:129552535-129554962 (-)
CAST/EiJ MGP_CASTEiJ_G0004381
 antisense lncRNA gene Chr7:123361910-123364341 (-)
CBA/J MGP_CBAJ_G0004416
 antisense lncRNA gene Chr7:141634662-141637093 (-)
DBA/2J MGP_DBA2J_G0004430
 antisense lncRNA gene Chr7:126335446-126337877 (-)
FVB/NJ MGP_FVBNJ_G0004447
 antisense lncRNA gene Chr7:126181170-126183601 (-)
LP/J MGP_LPJ_G0004511
 antisense lncRNA gene Chr7:133345960-133348391 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004436
 antisense lncRNA gene Chr7:142748696-142751126 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004621
 antisense lncRNA gene Chr7:130653525-130655956 (-)
PWK/PhJ MGP_PWKPhJ_G0004334
 antisense lncRNA gene Chr7:119344172-119346599 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004275
 antisense lncRNA gene Chr7:117469579-117472001 (-)
WSB/EiJ MGP_WSBEiJ_G0004420
 antisense lncRNA gene Chr7:131627782-131630212 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 629159 NCBI Gene Model | MGI Sequence Detail 2432 C57BL/6J ±  kb
transcript NR_024331 RefSeq | MGI Sequence Detail 2432 C57BL/6  
polypeptide Q8C4A9 UniProt | EBI | MGI Sequence Detail 185 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142192
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory