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Efcab15 Gene Detail
Summary
  • Symbol
    Efcab15
  • Name
    EF-hand calcium binding domain 15
  • Synonyms
    1700023F06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916691
    NCBI Gene: 69441
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:103089770-103099374 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 66.75 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    293 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916691
 protein coding gene Chr11:103089769-103099374 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019259
 protein coding gene Chr11:106256506-106265920 (-)
A/J MGP_AJ_G0019227
 protein coding gene Chr11:101747711-101756920 (-)
AKR/J MGP_AKRJ_G0019196
 protein coding gene Chr11:104881370-104890924 (-)
BALB/cJ MGP_BALBcJ_G0019201
 protein coding gene Chr11:102214469-102224045 (-)
C3H/HeJ MGP_C3HHeJ_G0019010
 protein coding gene Chr11:105109202-105121096 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019650
 protein coding gene Chr11:109560422-109570484 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017276
 protein coding gene Chr11:99156115-99164682 (-)
CAST/EiJ MGP_CASTEiJ_G0018564
 protein coding gene Chr11:106128890-106139563 (-)
CBA/J MGP_CBAJ_G0018979
 protein coding gene Chr11:114114516-114126581 (-)
DBA/2J MGP_DBA2J_G0019091
 protein coding gene Chr11:101253915-101263909 (-)
FVB/NJ MGP_FVBNJ_G0019081
 protein coding gene Chr11:100798166-100807711 (-)
LP/J MGP_LPJ_G0019160
 protein coding gene Chr11:106766473-106775734 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019112
 protein coding gene Chr11:113492640-113506709 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019688
 protein coding gene Chr11:105265960-105276589 (-)
PWK/PhJ MGP_PWKPhJ_G0018327
 protein coding gene Chr11:102326552-102336419 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018119
 protein coding gene Chr11:105016657-105026205 (-)
WSB/EiJ MGP_WSBEiJ_G0018613
 protein coding gene Chr11:105263998-105275209 (-)



Homology
more
  • Human Ortholog
    EFCAB15P, EF-hand calcium binding domain 15, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    EFCAB15P, EF-hand calcium binding domain 15, pseudogene
  • Links
    NCBI Gene ID: 118568824

  • Chr Location
    17q21.31; chr17:45245186-45251129 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020940 Ensembl Gene Model | MGI Sequence Detail 9605 C57BL/6J ±  kb
transcript ENSMUST00000021323 Ensembl | MGI Sequence Detail 1199 Not Applicable  
polypeptide ENSMUSP00000021323 Ensembl | MGI Sequence Detail 382 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 2
Other
Accession IDs
less
MGI:6358671
References
more
  • Summaries
    All 24
    Phenotypes 8
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory