Plet1os MGI Mouse Gene Detail - MGI:1916881 - placenta expressed transcript 1, opposite strand

Sequence Map

Chr9:50400099-50416105 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916881	antisense lncRNA gene	Chr9:50400083-50419123 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004625	antisense lncRNA gene	Chr9:49373671-49397844 (-)
A/J	MGP_AJ_G0004606	antisense lncRNA gene	Chr9:47869813-47888953 (-)
AKR/J	MGP_AKRJ_G0004589	antisense lncRNA gene	Chr9:48881051-48900002 (-)
BALB/cJ	MGP_BALBcJ_G0004590	antisense lncRNA gene	Chr9:47594183-47614027 (-)
C3H/HeJ	MGP_C3HHeJ_G0004539	antisense lncRNA gene	Chr9:49365088-49384189 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004740	antisense lncRNA gene	Chr9:50755503-50777126 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004191	antisense lncRNA gene	Chr9:47340227-47360487 (-)
CAST/EiJ	MGP_CASTEiJ_G0004497	antisense lncRNA gene	Chr9:49311047-49332974 (-)
CBA/J	MGP_CBAJ_G0004533	antisense lncRNA gene	Chr9:52562998-52584050 (-)
DBA/2J	MGP_DBA2J_G0004548	antisense lncRNA gene	Chr9:47733850-47753192 (-)
FVB/NJ	MGP_FVBNJ_G0004566	antisense lncRNA gene	Chr9:46956787-46976325 (-)
LP/J	MGP_LPJ_G0004629	antisense lncRNA gene	Chr9:49738426-49758619 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004554	antisense lncRNA gene	Chr9:54164846-54183985 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004739	antisense lncRNA gene	Chr9:48858280-48877318 (-)
PWK/PhJ	MGP_PWKPhJ_G0004450	antisense lncRNA gene	Chr9:47710616-47730463 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004390	antisense lncRNA gene	Chr9:49168673-49189193 (-)
WSB/EiJ	MGP_WSBEiJ_G0004538	antisense lncRNA gene	Chr9:48857109-48879792 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	69631	NCBI Gene Model \| MGI Sequence Detail	16007	C57BL/6J	± kb
	transcript	NR_040714	RefSeq \| MGI Sequence Detail	1119	ZRU/MplStud

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Summaries

All 11

Phenotypes 1
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for Plet1os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr89478	Chr9:50416079-50416121 (-)	5 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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