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2310040G24Rik Gene Detail
Summary
  • Symbol
    2310040G24Rik
  • Name
    RIKEN cDNA 2310040G24 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916897
    NCBI Gene: 381792
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:86460358-86465209 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 37.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    212 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916897
 lncRNA gene Chr6:86460343-86465355 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007005
 lincRNA gene Chr6:87771191-87777578 (-)
A/J MGP_AJ_G0007001
 lincRNA gene Chr6:84386293-84392104 (-)
AKR/J MGP_AKRJ_G0006969
 lincRNA gene Chr6:86832950-86837810 (-)
BALB/cJ MGP_BALBcJ_G0006977
 lincRNA gene Chr6:84393632-84405037 (-)
C3H/HeJ MGP_C3HHeJ_G0006948
 lincRNA gene Chr6:97630282-97635334 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007141
 lincRNA gene Chr6:90155163-90160029 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006835
 lincRNA gene Chr6:86898871-86903765 (-)
CBA/J MGP_CBAJ_G0006902
 lincRNA gene Chr6:93700494-93709099 (-)
DBA/2J MGP_DBA2J_G0006922
 lincRNA gene Chr6:83703733-83708729 (-)
FVB/NJ MGP_FVBNJ_G0006946
 lincRNA gene Chr6:82887230-82892409 (-)
LP/J MGP_LPJ_G0007008
 lincRNA gene Chr6:87814788-87820354 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006926
 lincRNA gene Chr6:97825168-97831037 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007146
 lincRNA gene Chr6:86671256-86676277 (-)
PWK/PhJ MGP_PWKPhJ_G0006774
 lincRNA gene Chr6:82646074-82651105 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006684
 lincRNA gene Chr6:85509715-85514951 (-)
WSB/EiJ MGP_WSBEiJ_G0006891
 lincRNA gene Chr6:87125526-87131726 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 381792 NCBI Gene Model | MGI Sequence Detail 4852 C57BL/6J ±  kb
transcript NR_040292 RefSeq | MGI Sequence Detail 794 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory