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Cd164l2 Gene Detail
Summary
  • Symbol
    Cd164l2
  • Name
    CD164 sialomucin-like 2
  • Synonyms
    2310047N01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916905
    NCBI Gene: 69655
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:132948120-132951865 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 66.24 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    204 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916905
 protein coding gene Chr4:132939442-132951866 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028888
 protein coding gene Chr4:135447021-135457336 (+)
A/J MGP_AJ_G0028847
 protein coding gene Chr4:129781358-129793859 (+)
AKR/J MGP_AKRJ_G0028800
 protein coding gene Chr4:133461385-133474229 (+)
BALB/cJ MGP_BALBcJ_G0028870
 protein coding gene Chr4:130401418-130413918 (+)
C3H/HeJ MGP_C3HHeJ_G0028584
 protein coding gene Chr4:133710866-133723674 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029312
 protein coding gene Chr4:140317492-140329904 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026583
 protein coding gene Chr4:122858869-122872366 (+)
CAST/EiJ MGP_CASTEiJ_G0028017
 protein coding gene Chr4:131823971-131836165 (+)
CBA/J MGP_CBAJ_G0028550
 protein coding gene Chr4:143971845-143984415 (+)
DBA/2J MGP_DBA2J_G0028699
 protein coding gene Chr4:130200648-130213151 (+)
FVB/NJ MGP_FVBNJ_G0028666
 protein coding gene Chr4:129073765-129086247 (+)
LP/J MGP_LPJ_G0028800
 protein coding gene Chr4:135574997-135585309 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028692
 protein coding gene Chr4:148498007-148510499 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029350
 protein coding gene Chr4:133883021-133895550 (+)
PWK/PhJ MGP_PWKPhJ_G0027738
 protein coding gene Chr4:126906374-126919487 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027564
 protein coding gene Chr4:129723678-129737848 (+)
WSB/EiJ MGP_WSBEiJ_G0028097
 protein coding gene Chr4:134048598-134063077 (+)



Homology
more
  • Human Ortholog
    CD164L2, CD164 molecule like 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CD164L2, CD164 molecule like 2
  • Synonyms
    EAPG6122, UNQ6122
  • Links
    NCBI Gene ID: 388611
    neXtProt AC: NX_Q6UWJ8
    UniProt: Q6UWJ8

  • Chr Location
    1p36.11; chr1:27379176-27383333 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Cd164l2
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69655 NCBI Gene Model | MGI Sequence Detail 3746 C57BL/6J ±  kb
transcript NM_027152 RefSeq | MGI Sequence Detail 986 C57BL/6  
polypeptide Q9D6W7 UniProt | EBI | MGI Sequence Detail 172 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:291779 Kolla L, et al., Characterization of the development of the mouse cochlear epithelium at the single cell level. Nat Commun. 2020 May 13;11(1):2389
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory