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Cdk3 Pseudogene Detail
Summary
  • Symbol
    Cdk3
  • Name
    cyclin dependent kinase 3
  • Synonyms
    Cdk3-ps
Location &
Maps
more
  • Sequence Map
    Chr11:116106829-116111113 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 81.02 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    183 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916931
 polymorphic pseudogene Chr11:116106828-116111113 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009935
 polymorphic pseudogene Chr11:120313927-120318211 (+)
A/J MGP_AJ_G0009920
 polymorphic pseudogene Chr11:115055504-115059790 (+)
AKR/J MGP_AKRJ_G0009904
 polymorphic pseudogene Chr11:118484768-118489178 (+)
BALB/cJ MGP_BALBcJ_G0009905
 polymorphic pseudogene Chr11:115467062-115471348 (+)
C3H/HeJ MGP_C3HHeJ_G0009837
 polymorphic pseudogene Chr11:118836323-118840609 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010150
 polymorphic pseudogene Chr11:124002384-124006668 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008948
 polymorphic pseudogene Chr11:112066962-112071471 (+)
CAST/EiJ MGP_CASTEiJ_G0009654
 polymorphic pseudogene Chr11:120196339-120200732 (+)
CBA/J MGP_CBAJ_G0009811
 polymorphic pseudogene Chr11:128890004-128894290 (+)
DBA/2J MGP_DBA2J_G0009838
 polymorphic pseudogene Chr11:114472395-114476681 (+)
FVB/NJ MGP_FVBNJ_G0009855
 polymorphic pseudogene Chr11:113986281-113990565 (+)
LP/J MGP_LPJ_G0009932
 polymorphic pseudogene Chr11:120693104-120697390 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009821
 polymorphic pseudogene Chr11:127974125-127978409 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010123
 polymorphic pseudogene Chr11:119141125-119145409 (+)
PWK/PhJ MGP_PWKPhJ_G0009576
 polymorphic pseudogene Chr11:115805779-115810082 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009409
 polymorphic pseudogene Chr11:118896554-118900869 (+)
WSB/EiJ MGP_WSBEiJ_G0009757
 polymorphic pseudogene Chr11:119112544-119116828 (+)



Homology
more
  • Human Ortholog
    CDK3, cyclin dependent kinase 3
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDK3, cyclin dependent kinase 3
  • Links
    NCBI Gene ID: 1018
    neXtProt AC: NX_Q00526
    UniProt: Q00526

  • Chr Location
    17q25.1; chr17:76000855-76005999 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Mice homozygous for a spontaneous null mutation do not exhibit any overt abnormalities.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    7
  • cDNA Data
    8
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092300 Ensembl Gene Model | MGI Sequence Detail 4285 C57BL/6J ±  kb
transcript ENSMUST00000174177 Ensembl | MGI Sequence Detail 915 Not Applicable  
polypeptide ENSMUSP00000134251 Ensembl | MGI Sequence Detail 304 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:6280489
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:45218 Ahuja HS, et al., Association of cyclin-dependent kinase 5 and its activator p35 with apoptotic cell death. Dev Genet. 1997;21(4):258-67
  • Latest
    J:307678 Campbell GJ, et al., The Role of CDKs and CDKIs in Murine Development. Int J Mol Sci. 2020 Jul 28;21(15):5343
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory