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Tfpt Gene Detail
Summary
  • Symbol
    Tfpt
  • Name
    TCF3 (E2A) fusion partner
  • Synonyms
    2400004F01Rik, Amida, FB1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916964
    NCBI Gene: 69714
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:3623323-3632911 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 2.09 cM, cytoband A1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    364 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916964
 protein coding gene Chr7:3623323-3632928 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031523
 protein coding gene Chr7:545768-555381 (-)
A/J MGP_AJ_G0031498
 protein coding gene Chr7:484248-493857 (-)
AKR/J MGP_AKRJ_G0031426
 protein coding gene Chr7:502402-512011 (-)
BALB/cJ MGP_BALBcJ_G0031506
 protein coding gene Chr7:497009-506624 (-)
C3H/HeJ MGP_C3HHeJ_G0031226
 protein coding gene Chr7:503270-512881 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031966
 protein coding gene Chr7:516770-526375 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029093
 protein coding gene Chr7:385726-396902 (-)
CAST/EiJ MGP_CASTEiJ_G0030595
 protein coding gene Chr7:504321-513948 (-)
CBA/J MGP_CBAJ_G0031186
 protein coding gene Chr7:640956-650565 (-)
DBA/2J MGP_DBA2J_G0031343
 protein coding gene Chr7:481783-491400 (-)
FVB/NJ MGP_FVBNJ_G0031295
 protein coding gene Chr7:476646-486269 (-)
LP/J MGP_LPJ_G0031428
 protein coding gene Chr7:552509-562132 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031334
 protein coding gene Chr7:547721-557330 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032000
 protein coding gene Chr7:490624-500245 (-)
PWK/PhJ MGP_PWKPhJ_G0030322
 protein coding gene Chr7:629323-639064 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030146
 protein coding gene Chr7:559792-569232 (-)
WSB/EiJ MGP_WSBEiJ_G0030689
 protein coding gene Chr7:493903-503518 (-)



Homology
more
  • Human Ortholog
    TFPT, TCF3 fusion partner
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TFPT, TCF3 fusion partner
  • Synonyms
    amida, FB1, INO80F
  • Links
    NCBI Gene ID: 29844
    neXtProt AC: NX_P0C1Z6
    UniProt: P0C1Z6

  • Chr Location
    19q13.42; chr19:54107020-54115657 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    46
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    25
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69714 NCBI Gene Model | MGI Sequence Detail 9589 C57BL/6J ±  kb
transcript NM_001290381 RefSeq | MGI Sequence Detail 1149 C57BL/6  
polypeptide Q3U1J1 UniProt | EBI | MGI Sequence Detail 259 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    Genomic 1
    cDNA 25

    Microarray probesets 5
Other
Accession IDs
less
MGI:2141966
References
more
  • Summaries
    All 35
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:221224 Min JN, et al., The mINO80 chromatin remodeling complex is required for efficient telomere replication and maintenance of genome stability. Cell Res. 2013 Dec;23(12):1396-413
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory