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Snhg8 Gene Detail
Summary
  • Symbol
    Snhg8
  • Name
    small nucleolar RNA host gene 8
  • Synonyms
    1110065M07Rik, 2010109N14Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917145
    NCBI Gene: 69895
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:123301201-123301985 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 54.58 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    181 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917145
 lncRNA gene Chr3:123301194-123302053 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015524
 unclassified non-coding RNA gene Chr3:125815328-125816180 (-)
A/J MGP_AJ_G0015501
 unclassified non-coding RNA gene Chr3:121604504-121605357 (-)
AKR/J MGP_AKRJ_G0015465
 unclassified non-coding RNA gene Chr3:124707982-124708835 (-)
BALB/cJ MGP_BALBcJ_G0015463
 unclassified non-coding RNA gene Chr3:121412424-121413277 (-)
C3H/HeJ MGP_C3HHeJ_G0015286
 unclassified non-coding RNA gene Chr3:125102135-125102988 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015917
 unclassified non-coding RNA gene Chr3:130374772-130375624 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013652
 unclassified non-coding RNA gene Chr3:117022528-117023366 (-)
CAST/EiJ MGP_CASTEiJ_G0014840
 unclassified non-coding RNA gene Chr3:124521475-124522315 (-)
CBA/J MGP_CBAJ_G0015267
 unclassified non-coding RNA gene Chr3:134774302-134775155 (-)
DBA/2J MGP_DBA2J_G0015361
 unclassified non-coding RNA gene Chr3:120735584-120736436 (-)
FVB/NJ MGP_FVBNJ_G0015368
 unclassified non-coding RNA gene Chr3:118356856-118357708 (-)
LP/J MGP_LPJ_G0015440
 unclassified non-coding RNA gene Chr3:127356251-127357103 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015392
 unclassified non-coding RNA gene Chr3:142351584-142352436 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015958
 unclassified non-coding RNA gene Chr3:124278315-124279167 (-)
PWK/PhJ MGP_PWKPhJ_G0014626
 unclassified non-coding RNA gene Chr3:120480068-120480921 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014414
 unclassified non-coding RNA gene Chr3:122388658-122389538 (-)
WSB/EiJ MGP_WSBEiJ_G0014946
 unclassified non-coding RNA gene Chr3:125030037-125030888 (-)



Homology
more
  • Human Ortholog
    SNHG8, small nucleolar RNA host gene 8
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNHG8, small nucleolar RNA host gene 8
  • Synonyms
    LINC00060, NCRNA00060
  • Links
    NCBI Gene ID: 100093630

  • Chr Location
    4q26; chr4:118278703-118285316 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    25
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    21
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Snhg8
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    808
  • Tissues
    99
  • cDNA Data
    5
  • Literature Summary
    3
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 69895 NCBI Gene Model | MGI Sequence Detail 785 C57BL/6J ±  kb
transcript NR_028574 RefSeq | MGI Sequence Detail 785 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
Other
Accession IDs
less
MGI:1923586
References
more
  • Summaries
    All 28
    Developmental Gene Expression 3
    Diseases 1
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory