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2610020C07Rik Gene Detail
Summary
  • Symbol
    2610020C07Rik
  • Name
    RIKEN cDNA 2610020C07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917168
    NCBI Gene: 69918
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:11021247-11043660 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 6.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    530 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917168
 lncRNA gene Chr16:11021193-11064068 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005640
 lincRNA gene Chr16:8067915-8091117 (+)
A/J MGP_AJ_G0005627
 lincRNA gene Chr16:7618426-7640819 (+)
AKR/J MGP_AKRJ_G0005606
 lincRNA gene Chr16:7969885-7996966 (+)
BALB/cJ MGP_BALBcJ_G0005607
 lincRNA gene Chr16:7762368-7784796 (+)
C3H/HeJ MGP_C3HHeJ_G0005554
 lincRNA gene Chr16:8045545-8067851 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005765
 lincRNA gene Chr16:8227124-8249475 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005127
 lincRNA gene Chr16:7787492-7804734 (+)
CAST/EiJ MGP_CASTEiJ_G0005498
 lincRNA gene Chr16:8069997-8092846 (+)
CBA/J MGP_CBAJ_G0005544
 lincRNA gene Chr16:8577679-8602267 (+)
DBA/2J MGP_DBA2J_G0005559
 lincRNA gene Chr16:7623221-7645575 (+)
FVB/NJ MGP_FVBNJ_G0005586
 lincRNA gene Chr16:7615498-7638176 (+)
LP/J MGP_LPJ_G0005643
 lincRNA gene Chr16:8016401-8038765 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005571
 lincRNA gene Chr16:8273201-8296958 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005765
 lincRNA gene Chr16:7915416-7939121 (+)
PWK/PhJ MGP_PWKPhJ_G0005445
 lincRNA gene Chr16:7852844-7875871 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005364
 lincRNA gene Chr16:7982625-8004733 (+)
WSB/EiJ MGP_WSBEiJ_G0005548
 lincRNA gene Chr16:8003209-8026578 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    1
  • cDNA Data
    13
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 69918 NCBI Gene Model | MGI Sequence Detail 22414 C57BL/6J ±  kb
transcript NR_038156 RefSeq | MGI Sequence Detail 2156 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 14
    cDNA 13
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313620 Nabeshima R, et al., Loss of Fam60a, a Sin3a subunit, results in embryonic lethality and is associated with aberrant methylation at a subset of gene promoters. Elife. 2018 Aug 2;7:e36435
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory