2810403D21Rik Gene Detail

Summary

• Symbol
  2810403D21Rik
• Name
  RIKEN cDNA 2810403D21 gene
• Synonyms
  1810022M18Rik, 4632410B05Rik

• Feature Type
  lncRNA gene
• IDs
  MGI:1917214
  NCBI Gene: 69964
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:107878084-107930502 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 47.90 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1095 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917214	lncRNA gene	ChrX:107877406-108018512 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015789	unclassified non-coding RNA gene	ChrX:105675169-105822859 (+)
A/J	MGP_AJ_G0015764	unclassified non-coding RNA gene	ChrX:105541360-105680535 (+)
AKR/J	MGP_AKRJ_G0015727	unclassified non-coding RNA gene	ChrX:108826381-108973540 (+)
BALB/cJ	MGP_BALBcJ_G0015725	unclassified non-coding RNA gene	ChrX:104217213-104367332 (+)
C3H/HeJ	MGP_C3HHeJ_G0015546	unclassified non-coding RNA gene	ChrX:106139547-106275037 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016180	unclassified non-coding RNA gene	ChrX:108712207-108870004 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013903	unclassified non-coding RNA gene	ChrX:102602520-102747995 (+)
CAST/EiJ	MGP_CASTEiJ_G0015102	unclassified non-coding RNA gene	ChrX:90183147-90317651 (+)
CBA/J	MGP_CBAJ_G0015525	unclassified non-coding RNA gene	ChrX:112142006-112286241 (+)
DBA/2J	MGP_DBA2J_G0015624	unclassified non-coding RNA gene	ChrX:104707597-104843779 (+)
FVB/NJ	MGP_FVBNJ_G0015629	unclassified non-coding RNA gene	ChrX:104089510-104234254 (+)
LP/J	MGP_LPJ_G0015706	unclassified non-coding RNA gene	ChrX:106688168-106832690 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015652	unclassified non-coding RNA gene	ChrX:117135221-117295082 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016225	unclassified non-coding RNA gene	ChrX:105234167-105375080 (+)
PWK/PhJ	MGP_PWKPhJ_G0014884	unclassified non-coding RNA gene	ChrX:87692360-87851521 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014670	unclassified non-coding RNA gene	ChrX:91011180-91157690 (+)
WSB/EiJ	MGP_WSBEiJ_G0015205	unclassified non-coding RNA gene	ChrX:103979828-104112434 (+)

Homology

• Gene Tree
  2810403D21Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  1
• GO References
  1

Expression

• Assay Results
  706
• cDNA Data
  10

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  57
• RefSeq
  1

• Ensembl
  ENSMUSG00000086629 (Evidence)
• NCBI Gene
  69964

Representative Sequences			Length	Strain/Species
genomic	69964	NCBI Gene Model | MGI Sequence Detail	52419	C57BL/6J
transcript	NR_015493	RefSeq | MGI Sequence Detail	1005	C57BL/6

Molecular
Reagents

• All nucleic 13

  cDNA 13

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:1916383, MGI:1925509, MGI:3034786

References

• Summaries
  All 19

  Gene Ontology 1

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:314543 Liang H, et al., LncRNA 2810403D21Rik/Mirf promotes ischemic myocardial injury by regulating autophagy through targeting Mir26a. Autophagy. 2020 Jun;16(6):1077-1091

TSS for 2810403D21Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr161840	ChrX:107878256-107878318 (+)	203 bp