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Tut1 Gene Detail
Summary
  • Symbol
    Tut1
  • Name
    terminal uridylyl transferase 1, U6 snRNA-specific
  • Synonyms
    2700038E08Rik, PAPD2, Rbm21, Tent1, TUTase6
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917294
    NCBI Gene: 70044
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8931211-8943574 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 6.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    351 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917294
 protein coding gene Chr19:8931199-8943574 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024826
 protein coding gene Chr19:6242615-6254814 (+)
A/J MGP_AJ_G0024794
 protein coding gene Chr19:5906827-5919435 (+)
AKR/J MGP_AKRJ_G0024769
 protein coding gene Chr19:6005692-6019488 (+)
BALB/cJ MGP_BALBcJ_G0024794
 protein coding gene Chr19:6016124-6028847 (+)
C3H/HeJ MGP_C3HHeJ_G0024560
 protein coding gene Chr19:6093679-6107118 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025241
 protein coding gene Chr19:6377005-6391516 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022670
 protein coding gene Chr19:6163371-6175572 (+)
CAST/EiJ MGP_CASTEiJ_G0024033
 protein coding gene Chr19:5743179-5759537 (+)
CBA/J MGP_CBAJ_G0024534
 protein coding gene Chr19:6497587-6509832 (+)
DBA/2J MGP_DBA2J_G0024661
 protein coding gene Chr19:5741560-5753831 (+)
FVB/NJ MGP_FVBNJ_G0024628
 protein coding gene Chr19:5812862-5825283 (+)
LP/J MGP_LPJ_G0024748
 protein coding gene Chr19:6137851-6153419 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024655
 protein coding gene Chr19:6357144-6370434 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025290
 protein coding gene Chr19:6054404-6067470 (+)
PWK/PhJ MGP_PWKPhJ_G0023778
 protein coding gene Chr19:5415067-5427326 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023583
 protein coding gene Chr19:5663912-5674657 (+)
WSB/EiJ MGP_WSBEiJ_G0024095
 protein coding gene Chr19:6023667-6037191 (+)



Homology
more
  • Human Ortholog
    TUT1, terminal uridylyl transferase 1, U6 snRNA-specific
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TUT1, terminal uridylyl transferase 1, U6 snRNA-specific
  • Synonyms
    PAPD2, RBM21, STARPAP, TENT1, TUTase, URLC6
  • Links
    NCBI Gene ID: 64852
    neXtProt AC: NX_Q9H6E5
    UniProt: Q9H6E5

  • Chr Location
    11q12.3; chr11:62575045-62591637 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    37
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    782
  • Tissues
    49
  • cDNA Data
    48
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071645 Ensembl Gene Model | MGI Sequence Detail 12364 C57BL/6J ±  kb
transcript ENSMUST00000096239 Ensembl | MGI Sequence Detail 2753 Not Applicable  
polypeptide ENSMUSP00000093958 Ensembl | MGI Sequence Detail 869 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 49
    cDNA 48
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 39
    Developmental Gene Expression 5
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:286260 Wang X, et al., LARP7-Mediated U6 snRNA Modification Ensures Splicing Fidelity and Spermatogenesis in Mice. Mol Cell. 2020 Mar 5;77(5):999-1013.e6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory