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Srrd Gene Detail
Summary
  • Symbol
    Srrd
  • Name
    SRR1 domain containing
  • Synonyms
    2810002G02Rik, Srr1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917368
    NCBI Gene: 70118
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:112485258-112490906 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 54.69 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    256 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917368
 protein coding gene Chr5:112485257-112490921 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029904
 protein coding gene Chr5:114914233-114919872 (-)
A/J MGP_AJ_G0029870
 protein coding gene Chr5:110441268-110446925 (-)
AKR/J MGP_AKRJ_G0029808
 protein coding gene Chr5:113948326-113953942 (-)
BALB/cJ MGP_BALBcJ_G0029881
 protein coding gene Chr5:111801680-111807312 (-)
C3H/HeJ MGP_C3HHeJ_G0029601
 protein coding gene Chr5:114391580-114397212 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030334
 protein coding gene Chr5:119407345-119412984 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027563
 protein coding gene Chr5:105264066-105269569 (-)
CAST/EiJ MGP_CASTEiJ_G0029009
 protein coding gene Chr5:113293732-113299291 (-)
CBA/J MGP_CBAJ_G0029568
 protein coding gene Chr5:123890212-123895844 (-)
DBA/2J MGP_DBA2J_G0029718
 protein coding gene Chr5:110508980-110514568 (-)
FVB/NJ MGP_FVBNJ_G0029675
 protein coding gene Chr5:109232279-109238047 (-)
LP/J MGP_LPJ_G0029806
 protein coding gene Chr5:115481416-115487065 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029706
 protein coding gene Chr5:128460941-128466573 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030375
 protein coding gene Chr5:113381262-113386909 (-)
PWK/PhJ MGP_PWKPhJ_G0028723
 protein coding gene Chr5:109116998-109122601 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028561
 protein coding gene Chr5:110866679-110872296 (-)
WSB/EiJ MGP_WSBEiJ_G0029085
 protein coding gene Chr5:113899452-113905069 (-)



Homology
more
  • Human Ortholog
    SRRD, SRR1 domain containing
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SRRD, SRR1 domain containing
  • Synonyms
    HC/HCC, SRR1L
  • Links
    NCBI Gene ID: 402055
    neXtProt AC: NX_Q9UH36
    UniProt: Q9UH36

  • Chr Location
    22q12.1; chr22:26483877-26494658 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    728
  • Tissues
    20
  • cDNA Data
    5
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029346 Ensembl Gene Model | MGI Sequence Detail 5649 C57BL/6J ±  kb
transcript ENSMUST00000146510 Ensembl | MGI Sequence Detail 1064 Not Applicable  
polypeptide ENSMUSP00000119870 Ensembl | MGI Sequence Detail 349 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:271694 Adachi Y, et al., The novel heme-dependent inducible protein, SRRD regulates heme biosynthesis and circadian rhythms. Arch Biochem Biophys. 2017 Oct 1;631:19-29
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory