Rbm3os Gene Detail

Summary

• Symbol
  Rbm3os
• Name
  RNA binding motif protein 3, opposite strand
• Synonyms
  2900002K06Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1917476
  NCBI Gene: 70226
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:8011668-8014203 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 3.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917476	antisense lncRNA gene	ChrX:8011666-8014203 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004717	antisense lncRNA gene	ChrX:2792063-2794596 (+)
A/J	MGP_AJ_G0004695	antisense lncRNA gene	ChrX:2767211-2769746 (+)
AKR/J	MGP_AKRJ_G0004678	antisense lncRNA gene	ChrX:2883693-2886229 (+)
BALB/cJ	MGP_BALBcJ_G0004679	antisense lncRNA gene	ChrX:2765441-2767988 (+)
C3H/HeJ	MGP_C3HHeJ_G0004627	antisense lncRNA gene	ChrX:2849006-2851541 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004828	antisense lncRNA gene	ChrX:2887177-2889710 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004269	antisense lncRNA gene	ChrX:2292315-2294354 (+)
CAST/EiJ	MGP_CASTEiJ_G0004584	antisense lncRNA gene	ChrX:2736244-2738774 (+)
CBA/J	MGP_CBAJ_G0004622	antisense lncRNA gene	ChrX:3038961-3041504 (+)
DBA/2J	MGP_DBA2J_G0004637	antisense lncRNA gene	ChrX:2753181-2755716 (+)
FVB/NJ	MGP_FVBNJ_G0004655	antisense lncRNA gene	ChrX:2719416-2721950 (+)
LP/J	MGP_LPJ_G0004719	antisense lncRNA gene	ChrX:2813283-2815832 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004641	antisense lncRNA gene	ChrX:2987459-2989995 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004828	antisense lncRNA gene	ChrX:2774038-2776573 (+)
PWK/PhJ	MGP_PWKPhJ_G0004536	antisense lncRNA gene	ChrX:2695426-2697957 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004473	antisense lncRNA gene	ChrX:2751925-2754482 (+)
WSB/EiJ	MGP_WSBEiJ_G0004627	antisense lncRNA gene	ChrX:2778105-2780640 (+)

Homology

• Gene Tree
  Rbm3os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  7
• Gene trapped
  7
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000055188 (Evidence)
• NCBI Gene
  70226

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000055188	Ensembl Gene Model | MGI Sequence Detail	2536	C57BL/6J
transcript	ENSMUST00000124018	Ensembl | MGI Sequence Detail	839	Not Applicable
polypeptide	Q8CEV7	UniProt | EBI | MGI Sequence Detail	106	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 2

References

• Summaries
  All 16

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81