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1500035N22Rik Gene Detail
Summary
  • Symbol
    1500035N22Rik
  • Name
    RIKEN cDNA 1500035N22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917508
    NCBI Gene: 70258
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:25190840-25203166 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 12.06 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    578 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917508
 lncRNA gene Chr5:25190839-25203174 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006593
 lincRNA gene Chr5:22761780-22774088 (+)
A/J MGP_AJ_G0006586
 lincRNA gene Chr5:21967515-21979910 (+)
AKR/J MGP_AKRJ_G0006556
 lincRNA gene Chr5:22860097-22872397 (+)
BALB/cJ MGP_BALBcJ_G0006561
 lincRNA gene Chr5:22477736-22490508 (+)
C3H/HeJ MGP_C3HHeJ_G0006508
 lincRNA gene Chr5:22959769-22973334 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006725
 lincRNA gene Chr5:24270855-24284762 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006434
 lincRNA gene Chr5:22162872-22175143 (+)
CBA/J MGP_CBAJ_G0006489
 lincRNA gene Chr5:24691509-24706721 (+)
DBA/2J MGP_DBA2J_G0006511
 lincRNA gene Chr5:22251031-22263656 (+)
FVB/NJ MGP_FVBNJ_G0006534
 lincRNA gene Chr5:21627810-21639962 (+)
LP/J MGP_LPJ_G0006593
 lincRNA gene Chr5:23167142-23181048 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006517
 lincRNA gene Chr5:25771122-25783328 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006731
 lincRNA gene Chr5:22490924-22504164 (+)
PWK/PhJ MGP_PWKPhJ_G0006372
 lincRNA gene Chr5:21353108-21366293 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006282
 lincRNA gene Chr5:21842077-21855564 (+)
WSB/EiJ MGP_WSBEiJ_G0006484
 lincRNA gene Chr5:22575719-22589231 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    19
  • Chemically induced (other)
    2
  • Gene trapped
    14
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving 1500035N22Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 70258 NCBI Gene Model | MGI Sequence Detail 12327 C57BL/6J ±  kb
transcript NR_166410 RefSeq | MGI Sequence Detail 865 C57BL/6  
polypeptide Q9DB06 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Diseases 1
    Phenotypes 13
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory