5730409K12Rik Gene Detail

Summary

• Symbol
  5730409K12Rik
• Name
  RIKEN cDNA 5730409K12 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1917744
  NCBI Gene: 70494
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:7059429-7068137 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 5.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917744	lncRNA gene	Chr19:7059429-7068137 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  2

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  1
• UniProt
  1

• NCBI Gene
  70494

Representative Sequences			Length	Strain/Species
genomic	70494	NCBI Gene Model | MGI Sequence Detail	8709	C57BL/6J
transcript	AK134852	GenBank | ENA | DDBJ | MGI Sequence Detail	3570	C57BL/6J
polypeptide	Q3UYA0	UniProt | EBI | MGI Sequence Detail	170	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 11
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563