6330417A16Rik Gene Detail

Summary

• Symbol
  6330417A16Rik
• Name
  RIKEN cDNA 6330417A16 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1918010
  NCBI Gene: 70760
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:59358729-59360475 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1918010	lncRNA gene	Chr15:59358729-59360475 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving 6330417A16Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3

• NCBI Gene
  70760

Representative Sequences			Length	Strain/Species
transcript	AK018186	GenBank | ENA | DDBJ | MGI Sequence Detail	1749	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 22

  Phenotypes 15
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27