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Zmynd8 Gene Detail
Summary
  • Symbol
    Zmynd8
  • Name
    zinc finger, MYND-type containing 8
  • Synonyms
    1110013E22Rik, 2010005I16Rik, 3632413B07Rik, mKIAA1125, Prkcbp1, RACK7, ZMYND8
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918025
    NCBI Gene: 228880
  • Alliance
    gene page
  • Transcription Start Sites
    35 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:165626072-165740896 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 85.98 cM, cytoband H3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3458 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918025
 protein coding gene Chr2:165626072-165740936 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026898
 protein coding gene Chr2:171363218-171495450 (-)
A/J MGP_AJ_G0026864
 protein coding gene Chr2:164344424-164461537 (-)
AKR/J MGP_AKRJ_G0026837
 protein coding gene Chr2:169244348-169371655 (-)
BALB/cJ MGP_BALBcJ_G0026873
 protein coding gene Chr2:164703656-164823464 (-)
C3H/HeJ MGP_C3HHeJ_G0026617
 protein coding gene Chr2:169598618-169721679 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027321
 protein coding gene Chr2:176340167-176474513 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024693
 protein coding gene Chr2:157727812-157844461 (-)
CAST/EiJ MGP_CASTEiJ_G0026075
 protein coding gene Chr2:170021655-170155203 (-)
CBA/J MGP_CBAJ_G0026594
 protein coding gene Chr2:182778776-182915241 (-)
DBA/2J MGP_DBA2J_G0026730
 protein coding gene Chr2:163498106-163612521 (-)
FVB/NJ MGP_FVBNJ_G0026698
 protein coding gene Chr2:161959429-162079154 (-)
LP/J MGP_LPJ_G0026832
 protein coding gene Chr2:171400327-171529084 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026717
 protein coding gene Chr2:186259135-186387634 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027377
 protein coding gene Chr2:169141277-169264630 (-)
PWK/PhJ MGP_PWKPhJ_G0025810
 protein coding gene Chr2:163107946-163231812 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025612
 protein coding gene Chr2:168055891-168189727 (-)
WSB/EiJ MGP_WSBEiJ_G0026146
 protein coding gene Chr2:170038773-170165825 (-)



Homology
more
  • Human Ortholog
    ZMYND8, zinc finger MYND-type containing 8
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZMYND8, zinc finger MYND-type containing 8
  • Synonyms
    PRKCBP1, PRO2893, RACK7
  • Links
    NCBI Gene ID: 23613
    neXtProt AC: NX_Q9ULU4
    UniProt: Q9ULU4

  • Chr Location
    20q13.12; chr20:47209214-47356889 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    18 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a conditional allele activated in mammary tissue exhibit reduced mammary tumors and abolished lung metastasis in a transgenic breast cancer model.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    27
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    745
  • Tissues
    35
  • cDNA Data
    245
  • Literature Summary
    9
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 228880 NCBI Gene Model | MGI Sequence Detail 114825 C57BL/6J ±  kb
    transcript NM_001291158 RefSeq | MGI Sequence Detail 7345 C57BL/6  
    polypeptide NP_001349947 RefSeq | MGI Sequence Detail 1256 C57BL/6  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 247
      cDNA 245
      Primer pair 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1917081, MGI:1920968, MGI:2138895, MGI:2139133
    References
    more
    • Summaries
      All 57
      Developmental Gene Expression 9
      Gene Ontology 3
      Phenotypes 18
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory