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Spats1 Gene Detail
Summary
  • Symbol
    Spats1
  • Name
    spermatogenesis associated, serine-rich 1
  • Synonyms
    1700011H05Rik, 4933400B06Rik, Srsp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918270
    NCBI Gene: 71020
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:45754156-45785864 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 22.44 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    990 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918270
 protein coding gene Chr17:45751504-45786341 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023787
 protein coding gene Chr17:46455625-46483627 (-)
A/J MGP_AJ_G0023745
 protein coding gene Chr17:45348794-45374686 (-)
AKR/J MGP_AKRJ_G0023716
 protein coding gene Chr17:45652573-45685032 (-)
BALB/cJ MGP_BALBcJ_G0023749
 protein coding gene Chr17:45238439-45265247 (-)
C3H/HeJ MGP_C3HHeJ_G0023513
 protein coding gene Chr17:46364842-46393872 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024192
 protein coding gene Chr17:48457065-48496533 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021642
 protein coding gene Chr17:42146118-42173186 (-)
CAST/EiJ MGP_CASTEiJ_G0022994
 protein coding gene Chr17:46460794-46490439 (-)
CBA/J MGP_CBAJ_G0023489
 protein coding gene Chr17:50181038-50216075 (-)
DBA/2J MGP_DBA2J_G0023615
 protein coding gene Chr17:44140538-44166551 (-)
FVB/NJ MGP_FVBNJ_G0023582
 protein coding gene Chr17:43715962-43745162 (-)
LP/J MGP_LPJ_G0023696
 protein coding gene Chr17:47105189-47133358 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023611
 protein coding gene Chr17:49746725-49778198 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024237
 protein coding gene Chr17:46012128-46039352 (-)
PWK/PhJ MGP_PWKPhJ_G0022739
 protein coding gene Chr17:43443233-43470921 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022554
 protein coding gene Chr17:42880915-42911080 (-)
WSB/EiJ MGP_WSBEiJ_G0023059
 protein coding gene Chr17:46538003-46564408 (-)



Homology
more
  • Human Ortholog
    SPATS1, spermatogenesis associated serine rich 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATS1, spermatogenesis associated serine rich 1
  • Synonyms
    DDIP, SPATA8, SRSP1
  • Links
    NCBI Gene ID: 221409
    neXtProt AC: NX_Q496A3
    UniProt: Q496A3

  • Chr Location
    6p21.1; chr6:44342650-44380179 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    10 phenotype references
Mice homozygous for a null allele show no overt phenotype, with normal fertility and spermatogenesis.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    12
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71020 NCBI Gene Model | MGI Sequence Detail 31709 C57BL/6J ±  kb
transcript NM_027649 RefSeq | MGI Sequence Detail 1160 C57BL/6  
polypeptide A2RRY8 UniProt | EBI | MGI Sequence Detail 269 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015500 spermatogenesis-associated serine-rich protein 1
    (term hierarchy)
  • InterPro Domains
    IPR029165 Spermatogenesis-associated serine-rich protein 1
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916539
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory