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4933402C06Rik Gene Detail
Summary
  • Symbol
    4933402C06Rik
  • Name
    RIKEN cDNA 4933402C06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918279
    NCBI Gene: 71029
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:40324161-40340684 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    729 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918279
 lncRNA gene Chr7:40324161-40340697 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007164
 lincRNA gene Chr7:40315633-40332995 (+)
A/J MGP_AJ_G0007160
 lincRNA gene Chr7:39380319-39396596 (+)
AKR/J MGP_AKRJ_G0007130
 lincRNA gene Chr7:40552709-40571353 (+)
BALB/cJ MGP_BALBcJ_G0007138
 lincRNA gene Chr7:39625969-39642446 (+)
C3H/HeJ MGP_C3HHeJ_G0007082
 lincRNA gene Chr7:41171230-41187603 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007303
 lincRNA gene Chr7:42312185-42328631 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006521
 lincRNA gene Chr7:39888062-39904312 (+)
CAST/EiJ MGP_CASTEiJ_G0006986
 lincRNA gene Chr7:32302215-32319325 (+)
CBA/J MGP_CBAJ_G0007064
 lincRNA gene Chr7:43644090-43663522 (+)
DBA/2J MGP_DBA2J_G0007086
 lincRNA gene Chr7:39305599-39322196 (+)
FVB/NJ MGP_FVBNJ_G0007108
 lincRNA gene Chr7:39040456-39057152 (+)
LP/J MGP_LPJ_G0007168
 lincRNA gene Chr7:40703445-40719609 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007087
 lincRNA gene Chr7:42405107-42422826 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007310
 lincRNA gene Chr7:39902282-39918692 (+)
PWK/PhJ MGP_PWKPhJ_G0006928
 lincRNA gene Chr7:32310427-32327233 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006839
 lincRNA gene Chr7:28625586-28642089 (+)
WSB/EiJ MGP_WSBEiJ_G0007047
 lincRNA gene Chr7:40336427-40353378 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 71029 NCBI Gene Model | MGI Sequence Detail 16524 C57BL/6J ±  kb
transcript NR_045504 RefSeq | MGI Sequence Detail 1000 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory