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Ccdc122 Gene Detail
Summary
  • Symbol
    Ccdc122
  • Name
    coiled-coil domain containing 122
  • Synonyms
    4933415L06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918358
    NCBI Gene: 108811
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:77274212-77349697 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 40.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1772 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918358
 protein coding gene Chr14:77274212-77349703 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021583
 protein coding gene Chr14:72029237-72090582 (+)
A/J MGP_AJ_G0021541
 protein coding gene Chr14:70327603-70396151 (+)
AKR/J MGP_AKRJ_G0021518
 protein coding gene Chr14:72419340-72491466 (+)
BALB/cJ MGP_BALBcJ_G0021548
 protein coding gene Chr14:70129003-70192030 (+)
C3H/HeJ MGP_C3HHeJ_G0021325
 protein coding gene Chr14:72135582-72206368 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021988
 protein coding gene Chr14:75134847-75213838 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019526
 protein coding gene Chr14:67917271-67982518 (+)
CAST/EiJ MGP_CASTEiJ_G0020842
 protein coding gene Chr14:68878075-68939369 (+)
CBA/J MGP_CBAJ_G0021293
 protein coding gene Chr14:77565966-77645983 (+)
DBA/2J MGP_DBA2J_G0021416
 protein coding gene Chr14:69715540-69783251 (+)
FVB/NJ MGP_FVBNJ_G0021394
 protein coding gene Chr14:69064268-69134798 (+)
LP/J MGP_LPJ_G0021486
 protein coding gene Chr14:73157015-73223036 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021421
 protein coding gene Chr14:76221167-76305056 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022011
 protein coding gene Chr14:71704834-71774047 (+)
PWK/PhJ MGP_PWKPhJ_G0020585
 protein coding gene Chr14:66498859-66567168 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020422
 protein coding gene Chr14:67689384-67746621 (+)
WSB/EiJ MGP_WSBEiJ_G0020895
 protein coding gene Chr14:72051193-72112563 (+)



Homology
more
  • Human Ortholog
    CCDC122, coiled-coil domain containing 122
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC122, coiled-coil domain containing 122
  • Links
    NCBI Gene ID: 160857
    neXtProt AC: NX_Q5T0U0
    UniProt: Q5T0U0

  • Chr Location
    13q14.11; chr13:43819018-43879740 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000034795 Ensembl Gene Model | MGI Sequence Detail 75486 C57BL/6J ±  kb
    transcript ENSMUST00000048208 Ensembl | MGI Sequence Detail 1721 Not Applicable  
    polypeptide ENSMUSP00000036369 Ensembl | MGI Sequence Detail 290 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      cDNA 16

      Microarray probesets 1
    References
    more
    • Summaries
      All 24
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory