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Oxsm Gene Detail
Summary
  • Symbol
    Oxsm
  • Name
    3-oxoacyl-ACP synthase, mitochondrial
  • Synonyms
    4933425A18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918397
    NCBI Gene: 71147
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:6219955-6231111 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 7.08 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    294 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918397
 protein coding gene Chr14:6219955-6231111 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021014
 protein coding gene Chr14:8860979-8873274 (-)
A/J MGP_AJ_G0020962
 protein coding gene Chr14:8602296-8613385 (-)
AKR/J MGP_AKRJ_G0020939
 protein coding gene Chr14:8815049-8826136 (-)
BALB/cJ MGP_BALBcJ_G0020965
 protein coding gene Chr14:8628108-8639411 (-)
C3H/HeJ MGP_C3HHeJ_G0020749
 protein coding gene Chr14:8937484-8953439 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021398
 protein coding gene Chr14:9114122-9125274 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018967
 protein coding gene Chr14:9221864-9233019 (-)
CAST/EiJ MGP_CASTEiJ_G0020272
 protein coding gene Chr14:8811558-8823963 (-)
CBA/J MGP_CBAJ_G0020715
 protein coding gene Chr14:9526015-9537081 (-)
DBA/2J MGP_DBA2J_G0020839
 protein coding gene Chr14:8539736-8550865 (-)
FVB/NJ MGP_FVBNJ_G0020821
 protein coding gene Chr14:8374441-8385569 (-)
LP/J MGP_LPJ_G0020914
 protein coding gene Chr14:8923653-8934772 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020847
 protein coding gene Chr14:9413752-9424841 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021431
 protein coding gene Chr14:8702325-8714202 (-)
PWK/PhJ MGP_PWKPhJ_G0020023
 protein coding gene Chr14:8559988-8571748 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019844
 protein coding gene Chr14:8926216-8938661 (-)
WSB/EiJ MGP_WSBEiJ_G0020329
 protein coding gene Chr14:8752761-8763901 (-)



Homology
more
  • Human Ortholog
    OXSM, 3-oxoacyl-ACP synthase, mitochondrial
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OXSM, 3-oxoacyl-ACP synthase, mitochondrial
  • Synonyms
    CEM1, FASN2D, KASI, KS
  • Links
    NCBI Gene ID: 54995
    neXtProt AC: NX_Q9NWU1
    UniProt: Q9NWU1

  • Chr Location
    3p24.2; chr3:25782917-25794534 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    21
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71147 NCBI Gene Model | MGI Sequence Detail 11157 C57BL/6J ±  kb
transcript NM_027695 RefSeq | MGI Sequence Detail 3759 C57BL/6  
polypeptide Q9D404 UniProt | EBI | MGI Sequence Detail 459 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 22
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGI:2145866
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory