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Tedc2 Gene Detail
Summary
  • Symbol
    Tedc2
  • Name
    tubulin epsilon and delta complex 2
  • Synonyms
    1600002H07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919266
    NCBI Gene: 72016
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:24434028-24439825 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 12.32 cM, cytoband A3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    273 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919266
 protein coding gene Chr17:24434028-24439825 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023293
 protein coding gene Chr17:23173134-23178918 (-)
A/J MGP_AJ_G0023253
 protein coding gene Chr17:22570452-22576265 (-)
AKR/J MGP_AKRJ_G0023220
 protein coding gene Chr17:22634801-22640604 (-)
BALB/cJ MGP_BALBcJ_G0023258
 protein coding gene Chr17:22745769-22751735 (-)
C3H/HeJ MGP_C3HHeJ_G0023018
 protein coding gene Chr17:22974660-22980547 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023701
 protein coding gene Chr17:24213858-24220433 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021178
 protein coding gene Chr17:20025560-20031516 (-)
CAST/EiJ MGP_CASTEiJ_G0022520
 protein coding gene Chr17:22809634-22815389 (-)
CBA/J MGP_CBAJ_G0022994
 protein coding gene Chr17:25042983-25048635 (-)
DBA/2J MGP_DBA2J_G0023123
 protein coding gene Chr17:22141463-22147210 (-)
FVB/NJ MGP_FVBNJ_G0023093
 protein coding gene Chr17:21860821-21866764 (-)
LP/J MGP_LPJ_G0023200
 protein coding gene Chr17:23487829-23493636 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023112
 protein coding gene Chr17:24762807-24768605 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023739
 protein coding gene Chr17:22902053-22907861 (-)
PWK/PhJ MGP_PWKPhJ_G0022269
 protein coding gene Chr17:20901566-20907563 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022088
 protein coding gene Chr17:20925025-20930794 (-)
WSB/EiJ MGP_WSBEiJ_G0022583
 protein coding gene Chr17:22969210-22975017 (-)



Homology
more
  • Human Ortholog
    TEDC2, tubulin epsilon and delta complex 2
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEDC2, tubulin epsilon and delta complex 2
  • Synonyms
    C16orf59
  • Links
    NCBI Gene ID: 80178
    neXtProt AC: NX_Q7L2K0
    UniProt: Q7L2K0

  • Chr Location
    16p13.3; chr16:2460086-2464963 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    37
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 72016 NCBI Gene Model | MGI Sequence Detail 5798 C57BL/6J ±  kb
transcript NM_028056 RefSeq | MGI Sequence Detail 2261 C57BL/6  
polypeptide Q6GQV0 UniProt | EBI | MGI Sequence Detail 436 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000036976 tubulin epsilon and delta complex protein 2
    (term hierarchy)
  • InterPro Domains
    IPR031518 Protein of unknown function DUF4693
  • GlyGen
    Q6GQV0 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 37
    cDNA 37

    Microarray probesets 2
Other
Accession IDs
less
MGI:5904756
References
more
  • Summaries
    All 28
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory