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1700029E06Rik Gene Detail
Summary
  • Symbol
    1700029E06Rik
  • Name
    RIKEN cDNA 1700029E06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919500
    NCBI Gene: 72250
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:58610382-58612635 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 31.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919500
 lncRNA gene Chr5:58610382-58612635 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006647
 lincRNA gene Chr5:57786708-57788961 (+)
A/J MGP_AJ_G0006641
 lincRNA gene Chr5:55639961-55642318 (+)
AKR/J MGP_AKRJ_G0006611
 lincRNA gene Chr5:57442017-57444270 (+)
BALB/cJ MGP_BALBcJ_G0006616
 lincRNA gene Chr5:56249924-56252962 (+)
C3H/HeJ MGP_C3HHeJ_G0006563
 lincRNA gene Chr5:57736357-57739165 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006781
 lincRNA gene Chr5:60121479-60123761 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006485
 lincRNA gene Chr5:56752915-56755028 (+)
CBA/J MGP_CBAJ_G0006544
 lincRNA gene Chr5:62105959-62112714 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0006588
 lincRNA gene Chr5:54965841-54968094 (+)
LP/J MGP_LPJ_G0006648
 lincRNA gene Chr5:58166277-58169029 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006572
 lincRNA gene Chr5:64025900-64029043 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006783
 lincRNA gene Chr5:57060412-57063170 (+)
PWK/PhJ MGP_PWKPhJ_G0006424
 lincRNA gene Chr5:54758985-54761224 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006332
 lincRNA gene Chr5:56479012-56483310 (+)
WSB/EiJ MGP_WSBEiJ_G0006536
 lincRNA gene Chr5:57229615-57233851 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving 1700029E06Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000100557 Ensembl Gene Model | MGI Sequence Detail 2254 C57BL/6J ±  kb
transcript ENSMUST00000189036 Ensembl | MGI Sequence Detail 757 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 23
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory