2610035D17Rik Gene Detail

Summary

• Symbol
  2610035D17Rik
• Name
  RIKEN cDNA 2610035D17 gene
• Synonyms
  Rason

• Feature Type
  lncRNA gene
• IDs
  MGI:1919636
  NCBI Gene: 72386
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr11:112934732-113092664 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 78.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  5114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1919636	lncRNA gene	Chr11:112934701-113092720 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005312	lincRNA gene	Chr11:116823040-116992823 (-)
A/J	MGP_AJ_G0005295	lincRNA gene	Chr11:111797284-111956069 (-)
AKR/J	MGP_AKRJ_G0005274	lincRNA gene	Chr11:115076550-115246147 (-)
BALB/cJ	MGP_BALBcJ_G0005277	lincRNA gene	Chr11:112200183-112358464 (-)
C3H/HeJ	MGP_C3HHeJ_G0005226	lincRNA gene	Chr11:115434552-115592709 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005429	lincRNA gene	Chr11:120341103-120511833 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004819	lincRNA gene	Chr11:108889756-109043270 (-)
CAST/EiJ	MGP_CASTEiJ_G0005173	lincRNA gene	Chr11:116676696-116843428 (-)
CBA/J	MGP_CBAJ_G0005215	lincRNA gene	Chr11:125264777-125419776 (-)
DBA/2J	MGP_DBA2J_G0005233	lincRNA gene	Chr11:111240239-111400862 (-)
FVB/NJ	MGP_FVBNJ_G0005258	lincRNA gene	Chr11:110688494-110852391 (-)
LP/J	MGP_LPJ_G0005314	lincRNA gene	Chr11:117257661-117427334 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005240	lincRNA gene	Chr11:124427182-124596723 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005433	lincRNA gene	Chr11:115729073-115896675 (-)
PWK/PhJ	MGP_PWKPhJ_G0005122	lincRNA gene	Chr11:112425992-112585087 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005043	lincRNA gene	Chr11:115521823-115688877 (-)
WSB/EiJ	MGP_WSBEiJ_G0005221	lincRNA gene	Chr11:115668561-115840982 (-)

Homology

• Gene Tree
  2610035D17Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  1 phenotype from multigenic genotypes
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  2
• Find Mice (IMSR)
  2 strains or lines available

Mice homozygous for a null allele are viable. However, mice homozygous for a null allele in a model of pancreatic intraepithelial neoplasia exhibit reduced incidence and tumor size.

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  11

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  60
• RefSeq
  1

• Ensembl
  ENSMUSG00000087259 (Evidence)
• NCBI Gene
  72386

Representative Sequences			Length	Strain/Species
genomic	72386	NCBI Gene Model | MGI Sequence Detail	157933	C57BL/6J
transcript	NR_015556	RefSeq | MGI Sequence Detail	1848	C57BL/6

Molecular
Reagents

• All nucleic 11

  cDNA 11

  
  

  Microarray probesets 2

References

• Summaries
  All 13

  Phenotypes 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:339253 Cheng R, et al., A novel protein RASON encoded by a lncRNA controls oncogenic RAS signaling in KRAS mutant cancers. Cell Res. 2023 Jan;33(1):30-45

TSS for 2610035D17Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr111624	Chr11:113092660-113092673 (-)	-3 bp
Tssr111623	Chr11:113088312-113088316 (-)	4,350 bp
Tssr111618	Chr11:113045966-113045983 (-)	46,689 bp
Tssr111617	Chr11:112954025-112954034 (-)	138,634 bp