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Zfta Gene Detail
Summary
  • Symbol
    Zfta
  • Name
    zinc finger translocation associated
  • Synonyms
    2700081O15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919667
    NCBI Gene: 108899
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:7394990-7403269 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.32 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919667
 protein coding gene Chr19:7394981-7403273 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024791
 protein coding gene Chr19:4554258-4562537 (+)
A/J MGP_AJ_G0024758
 protein coding gene Chr19:4192489-4200768 (+)
AKR/J MGP_AKRJ_G0024731
 protein coding gene Chr19:4327556-4335835 (+)
BALB/cJ MGP_BALBcJ_G0024758
 protein coding gene Chr19:4307288-4315718 (+)
C3H/HeJ MGP_C3HHeJ_G0024525
 protein coding gene Chr19:4462448-4470727 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025204
 protein coding gene Chr19:4642630-4650909 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022638
 protein coding gene Chr19:4100824-4109092 (+)
CAST/EiJ MGP_CASTEiJ_G0023998
 protein coding gene Chr19:4368426-4377144 (+)
CBA/J MGP_CBAJ_G0024498
 protein coding gene Chr19:4717895-4726520 (+)
DBA/2J MGP_DBA2J_G0024625
 protein coding gene Chr19:4158978-4167252 (+)
FVB/NJ MGP_FVBNJ_G0024590
 protein coding gene Chr19:4201365-4209556 (+)
LP/J MGP_LPJ_G0024711
 protein coding gene Chr19:4401874-4410153 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024620
 protein coding gene Chr19:4616902-4625179 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025252
 protein coding gene Chr19:4483235-4491514 (+)
PWK/PhJ MGP_PWKPhJ_G0023744
 protein coding gene Chr19:4220839-4229271 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023548
 protein coding gene Chr19:4292638-4300830 (+)
WSB/EiJ MGP_WSBEiJ_G0024060
 protein coding gene Chr19:4388160-4396433 (+)



Homology
more
  • Human Ortholog
    ZFTA, zinc finger translocation associated
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZFTA, zinc finger translocation associated
  • Synonyms
    C11orf95
  • Links
    NCBI Gene ID: 65998
    neXtProt AC: NX_C9JLR9
    UniProt: C9JLR9

  • Chr Location
    11q13.1; chr11:63759892-63768775 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Mice homozygous for a new allele exhibit no abnormal phenotype.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    742
  • Tissues
    34
  • cDNA Data
    125
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053080 Ensembl Gene Model | MGI Sequence Detail 8280 C57BL/6J ±  kb
transcript ENSMUST00000159348 Ensembl | MGI Sequence Detail 4989 Not Applicable  
polypeptide ENSMUSP00000123773 Ensembl | MGI Sequence Detail 678 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 125
    cDNA 125

    Microarray probesets 3
Other
Accession IDs
less
MGI:2147491, MGI:2147614, MGI:2147755, MGI:6492271
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:319546 Herranz-Perez V, et al., Ependymoma associated protein Zfta is expressed in immature ependymal cells but is not essential for ependymal development in mice. Sci Rep. 2022 Jan 27;12(1):1493
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory