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Hsdl1 Gene Detail
Summary
  • Symbol
    Hsdl1
  • Name
    hydroxysteroid dehydrogenase like 1
  • Synonyms
    2700067E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919802
    NCBI Gene: 72552
  • Alliance
    gene page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:120288728-120301922 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 67.95 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    410 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919802
 protein coding gene Chr8:120288717-120301930 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034185
 protein coding gene Chr8:122891893-122907426 (-)
A/J MGP_AJ_G0034165
 protein coding gene Chr8:117835778-117848949 (-)
AKR/J MGP_AKRJ_G0034092
 protein coding gene Chr8:121252197-121267403 (-)
BALB/cJ MGP_BALBcJ_G0034159
 protein coding gene Chr8:118037709-118051987 (-)
C3H/HeJ MGP_C3HHeJ_G0033870
 protein coding gene Chr8:121982902-121997284 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034679
 protein coding gene Chr8:127008982-127023426 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031621
 protein coding gene Chr8:110727956-110741054 (-)
CAST/EiJ MGP_CASTEiJ_G0033197
 protein coding gene Chr8:121925554-121938799 (-)
CBA/J MGP_CBAJ_G0033843
 protein coding gene Chr8:131619413-131638590 (-)
DBA/2J MGP_DBA2J_G0033999
 protein coding gene Chr8:117056272-117069802 (-)
FVB/NJ MGP_FVBNJ_G0033942
 protein coding gene Chr8:116084478-116098694 (-)
LP/J MGP_LPJ_G0034088
 protein coding gene Chr8:123033374-123048264 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033989
 protein coding gene Chr8:134066166-134086167 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034697
 protein coding gene Chr8:121403992-121419721 (-)
PWK/PhJ MGP_PWKPhJ_G0032899
 protein coding gene Chr8:116809469-116823213 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032739
 protein coding gene Chr8:120105601-120118668 (-)
WSB/EiJ MGP_WSBEiJ_G0033313
 protein coding gene Chr8:122124660-122140143 (-)



Homology
more
  • Human Ortholog
    HSDL1, hydroxysteroid dehydrogenase like 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HSDL1, hydroxysteroid dehydrogenase like 1
  • Synonyms
    SDR12C3
  • Links
    NCBI Gene ID: 83693
    neXtProt AC: NX_Q3SXM5
    UniProt: Q3SXM5

  • Chr Location
    16q24.1; chr16:84122141-84145192 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    7
  • cDNA Data
    67
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034189 Ensembl Gene Model | MGI Sequence Detail 13195 C57BL/6J ±  kb
transcript ENSMUST00000036049 Ensembl | MGI Sequence Detail 3141 Not Applicable  
polypeptide ENSMUSP00000044371 Ensembl | MGI Sequence Detail 330 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000008788 hydroxysteroid dehydrogenase-like protein 1
    (term hierarchy)
  • InterPro Domains
    IPR052149 17-beta-hydroxysteroid dehydrogenase type 3-like
    IPR036291 NAD(P)-binding domain superfamily
    IPR002347 Short-chain dehydrogenase/reductase SDR
  • GlyGen
    Q8BTX9 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 4
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory