About   Help   FAQ
2700089I24Rik Gene Detail
Summary
  • Symbol
    2700089I24Rik
  • Name
    RIKEN cDNA 2700089I24 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919897
    NCBI Gene: 72647
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr19:59481568-59547823 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1748 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919897
 lncRNA gene Chr19:59481568-59547823 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005848
 lincRNA gene Chr19:60017879-60092233 (+)
A/J MGP_AJ_G0005840
 lincRNA gene Chr19:57090213-57160310 (+)
AKR/J MGP_AKRJ_G0005815
 lincRNA gene Chr19:58858936-58929735 (+)
BALB/cJ MGP_BALBcJ_G0005819
 lincRNA gene Chr19:57156165-57224869 (+)
C3H/HeJ MGP_C3HHeJ_G0005766
 lincRNA gene Chr19:59124697-59194545 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005980
 lincRNA gene Chr19:61457679-61528900 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005703
 lincRNA gene Chr19:59209457-59287640 (+)
CBA/J MGP_CBAJ_G0005751
 lincRNA gene Chr19:64469989-64557668 (+)
DBA/2J MGP_DBA2J_G0005772
 lincRNA gene Chr19:56854211-56922993 (+)
FVB/NJ MGP_FVBNJ_G0005798
 lincRNA gene Chr19:56578511-56645647 (+)
LP/J MGP_LPJ_G0005852
 lincRNA gene Chr19:59887264-59958546 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005785
 lincRNA gene Chr19:63669696-63752231 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005976
 lincRNA gene Chr19:59112663-59190117 (+)
PWK/PhJ MGP_PWKPhJ_G0005652
 lincRNA gene Chr19:56850825-56919910 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005565
 lincRNA gene Chr19:57767992-57844326 (+)
WSB/EiJ MGP_WSBEiJ_G0005756
 lincRNA gene Chr19:59215998-59288996 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 72647 NCBI Gene Model | MGI Sequence Detail 66256 C57BL/6J ±  kb
transcript NR_045308 RefSeq | MGI Sequence Detail 1827 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory