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Calhm2 Gene Detail
Summary
  • Symbol
    Calhm2
  • Name
    calcium homeostasis modulator family member 2
  • Synonyms
    2810048G17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919941
    NCBI Gene: 72691
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:47120671-47126733 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 39.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    291 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919941
 protein coding gene Chr19:47093792-47126733 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025224
 protein coding gene Chr19:46882994-46915844 (-)
A/J MGP_AJ_G0025200
 protein coding gene Chr19:44540580-44574302 (-)
AKR/J MGP_AKRJ_G0025169
 protein coding gene Chr19:46000109-46032966 (-)
BALB/cJ MGP_BALBcJ_G0025195
 protein coding gene Chr19:44598588-44631795 (-)
C3H/HeJ MGP_C3HHeJ_G0024955
 protein coding gene Chr19:46178217-46210934 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025638
 protein coding gene Chr19:48003874-48037031 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023051
 protein coding gene Chr19:43783555-43817294 (-)
CAST/EiJ MGP_CASTEiJ_G0024420
 protein coding gene Chr19:45990997-46024858 (-)
CBA/J MGP_CBAJ_G0024935
 protein coding gene Chr19:50438709-50474768 (-)
DBA/2J MGP_DBA2J_G0025067
 protein coding gene Chr19:44356689-44389636 (-)
FVB/NJ MGP_FVBNJ_G0025028
 protein coding gene Chr19:44146388-44179626 (-)
LP/J MGP_LPJ_G0025153
 protein coding gene Chr19:46778188-46811058 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025059
 protein coding gene Chr19:49728746-49761609 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025696
 protein coding gene Chr19:46116626-46150745 (-)
PWK/PhJ MGP_PWKPhJ_G0024169
 protein coding gene Chr19:44318755-44352519 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023972
 protein coding gene Chr19:44775520-44810927 (-)
WSB/EiJ MGP_WSBEiJ_G0024490
 protein coding gene Chr19:46261533-46298013 (-)



Homology
more
  • Human Ortholog
    CALHM2, calcium homeostasis modulator family member 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CALHM2, calcium homeostasis modulator family member 2
  • Synonyms
    FAM26B
  • Links
    NCBI Gene ID: 51063
    neXtProt AC: NX_Q9HA72
    UniProt: Q9HA72

  • Chr Location
    10q24.33; chr10:103446786-103452402 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    768
  • Tissues
    28
  • cDNA Data
    17
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 72691 NCBI Gene Model | MGI Sequence Detail 6063 C57BL/6J ±  kb
    transcript NM_133746 RefSeq | MGI Sequence Detail 2049 C57BL/6  
    polypeptide Q8VEC4 UniProt | EBI | MGI Sequence Detail 323 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 20
      cDNA 17
      Primer pair 2
      Other 1

      Microarray probesets 2
    References
    more
    • Summaries
      All 35
      Developmental Gene Expression 3
      Gene Ontology 6
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345825 Choi SW, et al., Calcium homeostasis modulator 2 (Calhm2) as slowly activating membrane current channel in mouse B cells. Biochem Biophys Res Commun. 2024 Mar 5;699:149561
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory