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2900079G21Rik Gene Detail
Summary
  • Symbol
    2900079G21Rik
  • Name
    RIKEN cDNA 2900079G21 gene
  • Synonyms
    Gm6179
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920268
    NCBI Gene: 620760
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:112063345-112177993 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 62.55 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3539 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920268
 lncRNA gene Chr9:112063266-112177993 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007514
 lincRNA gene Chr9:114510891-114630428 (+)
A/J MGP_AJ_G0007509
 lincRNA gene Chr9:110297668-110411307 (+)
AKR/J MGP_AKRJ_G0007481
 lincRNA gene Chr9:113066003-113176364 (+)
BALB/cJ MGP_BALBcJ_G0007486
 lincRNA gene Chr9:110084016-110199632 (+)
C3H/HeJ MGP_C3HHeJ_G0007431
 lincRNA gene Chr9:113570185-113700527 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007658
 lincRNA gene Chr9:117638899-117764168 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006839
 lincRNA gene Chr9:107499289-107606619 (+)
CAST/EiJ MGP_CASTEiJ_G0007334
 lincRNA gene Chr9:113389886-113518501 (+)
CBA/J MGP_CBAJ_G0007412
 lincRNA gene Chr9:121973723-122112561 (+)
DBA/2J MGP_DBA2J_G0007438
 lincRNA gene Chr9:109754842-109864275 (+)
FVB/NJ MGP_FVBNJ_G0007454
 lincRNA gene Chr9:108591066-108702668 (+)
LP/J MGP_LPJ_G0007518
 lincRNA gene Chr9:114798407-114919113 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007435
 lincRNA gene Chr9:123243386-123371748 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007663
 lincRNA gene Chr9:113416752-113541921 (+)
PWK/PhJ MGP_PWKPhJ_G0007275
 lincRNA gene Chr9:110019231-110133598 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007179
 lincRNA gene Chr9:113531637-113655876 (+)
WSB/EiJ MGP_WSBEiJ_G0007394
 lincRNA gene Chr9:113295954-113412022 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic 620760 NCBI Gene Model | MGI Sequence Detail 114649 C57BL/6J ±  kb
transcript NR_033432 RefSeq | MGI Sequence Detail 2961 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
Other
Accession IDs
less
MGI:3779565
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory