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Ttc9b Gene Detail
Summary
  • Symbol
    Ttc9b
  • Name
    tetratricopeptide repeat domain 9B
  • Synonyms
    2900074C18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920282
    NCBI Gene: 73032
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:27353349-27355632 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 15.95 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920282
 protein coding gene Chr7:27353340-27356771 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031919
 protein coding gene Chr7:26337928-26341349 (+)
A/J MGP_AJ_G0031898
 protein coding gene Chr7:25688897-25692316 (+)
AKR/J MGP_AKRJ_G0031828
 protein coding gene Chr7:26377045-26380464 (+)
BALB/cJ MGP_BALBcJ_G0031903
 protein coding gene Chr7:25901734-25905153 (+)
C3H/HeJ MGP_C3HHeJ_G0031625
 protein coding gene Chr7:26752878-26756309 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032368
 protein coding gene Chr7:27222878-27226309 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029420
 protein coding gene Chr7:26905734-26909131 (+)
CAST/EiJ MGP_CASTEiJ_G0030960
 protein coding gene Chr7:20083022-20086449 (+)
CBA/J MGP_CBAJ_G0031590
 protein coding gene Chr7:28425496-28428927 (+)
DBA/2J MGP_DBA2J_G0031742
 protein coding gene Chr7:25478571-25482002 (+)
FVB/NJ MGP_FVBNJ_G0031698
 protein coding gene Chr7:25585710-25589141 (+)
LP/J MGP_LPJ_G0031822
 protein coding gene Chr7:26675688-26679119 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031733
 protein coding gene Chr7:27973980-27977411 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032399
 protein coding gene Chr7:25910168-25913587 (+)
PWK/PhJ MGP_PWKPhJ_G0030684
 protein coding gene Chr7:20530619-20534167 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030518
 protein coding gene Chr7:16895277-16898701 (+)
WSB/EiJ MGP_WSBEiJ_G0031068
 protein coding gene Chr7:26196147-26199578 (+)



Homology
more
  • Human Ortholog
    TTC9B, tetratricopeptide repeat domain 9B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTC9B, tetratricopeptide repeat domain 9B
  • Links
    NCBI Gene ID: 148014
    neXtProt AC: NX_Q8N6N2
    UniProt: Q8N6N2

  • Chr Location
    19q13.2; chr19:40216058-40218384 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    753
  • Tissues
    14
  • cDNA Data
    6
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73032 NCBI Gene Model | MGI Sequence Detail 2284 C57BL/6J ±  kb
transcript NM_028417 RefSeq | MGI Sequence Detail 1032 Not Specified  
polypeptide Q9D6E4 UniProt | EBI | MGI Sequence Detail 239 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Developmental Gene Expression 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory