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Speer6-ps1 Pseudogene Detail
Summary
  • Symbol
    Speer6-ps1
  • Name
    spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
  • Synonyms
    1700039A02Rik, SPEER-6
  • Feature Type
    pseudogene
  • IDs
    MGI:1920516
    NCBI Gene: 73266
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:3236206-3239317 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 1.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920516
 pseudogene Chr13:3199475-3239678 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • Mutations/Alleles
    1 with disease annotations
  • References
    23 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    447 phenotypes from multigenic genotypes
    28 images
    1536 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    7
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091304 Ensembl Gene Model | MGI Sequence Detail 3112 C57BL/6J ±  kb
transcript ENSMUST00000168736 Ensembl | MGI Sequence Detail 545 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2176226
References
more
  • Summaries
    All 1549
    Diseases 23
    Phenotypes 1536
  • Earliest
    J:51826 Postic C, et al., Dual roles for glucokinase in glucose homeostasis as determined by liver and pancreatic beta cell-specific gene knock-outs using Cre recombinase. J Biol Chem. 1999 Jan 1;274(1):305-15
  • Latest
    J:357730 Miao B, et al., SMYD5 is a ribosomal methyltransferase that catalyzes RPL40 lysine methylation to enhance translation output and promote hepatocellular carcinoma. Cell Res. 2024 Sep;34(9):648-660
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory