1700023G09Rik MGI Mouse Gene Detail - MGI:1920531

Sequence Map

Chr1:186659130-186662309 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920531	lncRNA gene	Chr1:186657659-186662444 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005077	lincRNA gene	Chr1:193734407-193737586 (+)
A/J	MGP_AJ_G0005060	lincRNA gene	Chr1:185799574-185802753 (+)
AKR/J	MGP_AKRJ_G0005038	lincRNA gene	Chr1:191269136-191272315 (+)
BALB/cJ	MGP_BALBcJ_G0005041	lincRNA gene	Chr1:186475788-186478967 (+)
C3H/HeJ	MGP_C3HHeJ_G0004990	lincRNA gene	Chr1:192141173-192144352 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005191	lincRNA gene	Chr1:199908807-199911986 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004598	lincRNA gene	Chr1:176778551-176781691 (+)
CAST/EiJ	MGP_CASTEiJ_G0004937	lincRNA gene	Chr1:191631127-191634287 (+)
CBA/J	MGP_CBAJ_G0004980	lincRNA gene	Chr1:207376760-207379939 (+)
DBA/2J	MGP_DBA2J_G0004999	lincRNA gene	Chr1:184566609-184569788 (+)
FVB/NJ	MGP_FVBNJ_G0005020	lincRNA gene	Chr1:182646108-182649287 (+)
LP/J	MGP_LPJ_G0005078	lincRNA gene	Chr1:194907854-194911033 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005003	lincRNA gene	Chr1:214195476-214199319 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005198	lincRNA gene	Chr1:191176282-191179461 (+)
PWK/PhJ	MGP_PWKPhJ_G0004888	lincRNA gene	Chr1:183781241-183784417 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004813	lincRNA gene	Chr1:190126265-190129440 (+)
WSB/EiJ	MGP_WSBEiJ_G0004984	lincRNA gene	Chr1:191347659-191350811 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000103503	Ensembl Gene Model \| MGI Sequence Detail	3180	C57BL/6J	± kb
	transcript	ENSMUST00000194513	Ensembl \| MGI Sequence Detail	1460	Not Applicable

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Summaries

All 8
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700023G09Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr10635	Chr1:186659105-186659131 (+)	-12 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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