1700058P15Rik MGI Mouse Gene Detail - MGI:1920627

Sequence Map

Chr7:18992417-18993664 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920627	lncRNA gene	Chr7:18992417-18993664 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004413	antisense lncRNA gene	Chr7:17234629-17235876 (+)
A/J	MGP_AJ_G0004390	antisense lncRNA gene	Chr7:16901510-16902757 (+)
AKR/J	MGP_AKRJ_G0004372	antisense lncRNA gene	Chr7:17362657-17363904 (+)
BALB/cJ	MGP_BALBcJ_G0004376	antisense lncRNA gene	Chr7:17102290-17103537 (+)
C3H/HeJ	MGP_C3HHeJ_G0004325	antisense lncRNA gene	Chr7:17627998-17629317 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004525	antisense lncRNA gene	Chr7:18112527-18113774 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003983	antisense lncRNA gene	Chr7:18547573-18548997 (+)
CAST/EiJ	MGP_CASTEiJ_G0004285	antisense lncRNA gene	Chr7:14033259-14034506 (+)
CBA/J	MGP_CBAJ_G0004319	antisense lncRNA gene	Chr7:18782184-18783431 (+)
DBA/2J	MGP_DBA2J_G0004334	antisense lncRNA gene	Chr7:16840819-16842066 (+)
FVB/NJ	MGP_FVBNJ_G0004352	antisense lncRNA gene	Chr7:16701931-16703178 (+)
LP/J	MGP_LPJ_G0004414	antisense lncRNA gene	Chr7:17568368-17569615 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004343	antisense lncRNA gene	Chr7:18631890-18633137 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004524	antisense lncRNA gene	Chr7:16969527-16970774 (+)
PWK/PhJ	MGP_PWKPhJ_G0004238	antisense lncRNA gene	Chr7:13928608-13929896 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004179	antisense lncRNA gene	Chr7:11684714-11685969 (+)
WSB/EiJ	MGP_WSBEiJ_G0004324	antisense lncRNA gene	Chr7:17183556-17184803 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000089636	Ensembl Gene Model \| MGI Sequence Detail	1248	C57BL/6J	± kb
	transcript	ENSMUST00000159981	Ensembl \| MGI Sequence Detail	413	Not Applicable

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Summaries

All 6
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700058P15Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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