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1700060J05Rik Gene Detail
Summary
  • Symbol
    1700060J05Rik
  • Name
    RIKEN cDNA 1700060J05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920641
    NCBI Gene: 73391
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:53562983-53564697 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 28.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920641
 lncRNA gene Chr4:53561146-53564697 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003902
 antisense lncRNA gene Chr4:52208560-52210274 (-)
A/J MGP_AJ_G0003882
 antisense lncRNA gene Chr4:50204833-50206547 (-)
AKR/J MGP_AKRJ_G0003859
 antisense lncRNA gene Chr4:51576532-51578246 (-)
BALB/cJ MGP_BALBcJ_G0003869
 antisense lncRNA gene Chr4:50391134-50392848 (-)
C3H/HeJ MGP_C3HHeJ_G0003815
 antisense lncRNA gene Chr4:52126508-52128222 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004016
 antisense lncRNA gene Chr4:54123967-54125681 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003508
 antisense lncRNA gene Chr4:47160046-47161773 (-)
CAST/EiJ MGP_CASTEiJ_G0003780
 antisense lncRNA gene Chr4:51773351-51775061 (-)
CBA/J MGP_CBAJ_G0003808
 antisense lncRNA gene Chr4:55979083-55980797 (-)
DBA/2J MGP_DBA2J_G0003825
 antisense lncRNA gene Chr4:50174418-50176132 (-)
FVB/NJ MGP_FVBNJ_G0003843
 antisense lncRNA gene Chr4:49399669-49401383 (-)
LP/J MGP_LPJ_G0003904
 antisense lncRNA gene Chr4:52312763-52314477 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003831
 antisense lncRNA gene Chr4:59181589-59183303 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004012
 antisense lncRNA gene Chr4:51809739-51811453 (-)
PWK/PhJ MGP_PWKPhJ_G0003735
 antisense lncRNA gene Chr4:50125411-50127121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003681
 antisense lncRNA gene Chr4:51097350-51099059 (-)
WSB/EiJ MGP_WSBEiJ_G0003815
 antisense lncRNA gene Chr4:51714096-51715806 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084970 Ensembl Gene Model | MGI Sequence Detail 1715 C57BL/6J ±  kb
transcript ENSMUST00000138377 Ensembl | MGI Sequence Detail 1060 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory