Cntrobos Gene Detail

Summary

• Symbol
  Cntrobos
• Name
  centrobin, centrosomal BRCA2 interacting protein, opposite strand
• Synonyms
  1700067G03Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1920671
  NCBI Gene: 73421
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:69184977-69186303 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 42.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920671	antisense lncRNA gene	Chr11:69184977-69186303 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003001	antisense lncRNA gene	Chr11:69715582-69716908 (+)
A/J	MGP_AJ_G0002978	antisense lncRNA gene	Chr11:67091392-67092718 (+)
AKR/J	MGP_AKRJ_G0002959	antisense lncRNA gene	Chr11:69090205-69091536 (+)
BALB/cJ	MGP_BALBcJ_G0002965	antisense lncRNA gene	Chr11:67411598-67412924 (+)
C3H/HeJ	MGP_C3HHeJ_G0002921	antisense lncRNA gene	Chr11:69115710-69117036 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003107	antisense lncRNA gene	Chr11:71827115-71828441 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0002891	antisense lncRNA gene	Chr11:69357568-69358894 (+)
CBA/J	MGP_CBAJ_G0002918	antisense lncRNA gene	Chr11:75042869-75044195 (+)
DBA/2J	MGP_DBA2J_G0002925	antisense lncRNA gene	Chr11:66686593-66687919 (+)
FVB/NJ	MGP_FVBNJ_G0002943	antisense lncRNA gene	Chr11:66310060-66311386 (+)
LP/J	MGP_LPJ_G0003000	antisense lncRNA gene	Chr11:70285928-70287254 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002931	antisense lncRNA gene	Chr11:75661323-75662649 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003111	antisense lncRNA gene	Chr11:69351147-69352473 (+)
PWK/PhJ	MGP_PWKPhJ_G0002850	antisense lncRNA gene	Chr11:67326867-67328193 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002796	antisense lncRNA gene	Chr11:69173666-69175048 (+)
WSB/EiJ	MGP_WSBEiJ_G0002921	antisense lncRNA gene	Chr11:69028925-69030251 (+)

Homology

• Gene Tree
  Cntrobos
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Cntrobos
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087003 (Evidence)
• NCBI Gene
  73421

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087003	Ensembl Gene Model | MGI Sequence Detail	1327	C57BL/6J
transcript	ENSMUST00000132834	Ensembl | MGI Sequence Detail	383	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573