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Ms4a13 Gene Detail
Summary
  • Symbol
    Ms4a13
  • Name
    membrane-spanning 4-domains, subfamily A, member 13
  • Synonyms
    1700060E18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920716
    NCBI Gene: 73466
  • Member of
    Ms4ac cluster
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:11146782-11174101 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 7.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    949 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920716
 protein coding gene Chr19:11146782-11174101 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024871
 protein coding gene Chr19:8563858-8590360 (-)
A/J MGP_AJ_G0024839
 protein coding gene Chr19:7997706-8030863 (-)
AKR/J MGP_AKRJ_G0024814
 protein coding gene Chr19:8299807-8328942 (-)
BALB/cJ MGP_BALBcJ_G0024839
 protein coding gene Chr19:8034603-8062205 (-)
C3H/HeJ MGP_C3HHeJ_G0024605
 protein coding gene Chr19:8184486-8214038 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025287
 protein coding gene Chr19:8953465-8981846 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022714
 protein coding gene Chr19:8409486-8435927 (-)
CAST/EiJ MGP_CASTEiJ_G0024078
 protein coding gene Chr19:7828410-7856670 (-)
CBA/J MGP_CBAJ_G0024579
 protein coding gene Chr19:8995492-9025918 (-)
DBA/2J MGP_DBA2J_G0024706
 protein coding gene Chr19:7991716-8019293 (-)
FVB/NJ MGP_FVBNJ_G0024673
 protein coding gene Chr19:8028825-8052149 (-)
LP/J MGP_LPJ_G0024793
 protein coding gene Chr19:8518151-8546572 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024700
 protein coding gene Chr19:8881761-8915126 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025335
 protein coding gene Chr19:8328256-8354904 (-)
PWK/PhJ MGP_PWKPhJ_G0023823
 protein coding gene Chr19:7449923-7475030 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023628
 protein coding gene Chr19:7528264-7555409 (-)
WSB/EiJ MGP_WSBEiJ_G0024140
 protein coding gene Chr19:8214652-8247342 (-)



Homology
more
  • Human Ortholog
    MS4A13, membrane spanning 4-domains A13
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MS4A13, membrane spanning 4-domains A13
  • Links
    NCBI Gene ID: 503497
    neXtProt AC: NX_Q5J8X5
    UniProt: Q5J8X5

  • Chr Location
    chr11:60515392-60543424 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype reference
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73466 NCBI Gene Model | MGI Sequence Detail 27320 C57BL/6J ±  kb
transcript NM_198224 RefSeq | MGI Sequence Detail 1375 C57BL/6  
polypeptide Q5FWC3 UniProt | EBI | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory