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1700066N21Rik Gene Detail
Summary
  • Symbol
    1700066N21Rik
  • Name
    RIKEN cDNA 1700066N21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920721
    NCBI Gene: 73471
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:88056447-88127210 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2032 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920721
 lncRNA gene Chr5:88056438-88127210 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004110
 antisense lncRNA gene Chr5:88881963-88958338 (-)
A/J MGP_AJ_G0004091
 antisense lncRNA gene Chr5:85252205-85327129 (-)
AKR/J MGP_AKRJ_G0004069
 antisense lncRNA gene Chr5:88074777-88149937 (-)
BALB/cJ MGP_BALBcJ_G0004077
 antisense lncRNA gene Chr5:86172917-86248243 (-)
C3H/HeJ MGP_C3HHeJ_G0004023
 antisense lncRNA gene Chr5:88477905-88546196 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004225
 antisense lncRNA gene Chr5:92531019-92603603 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003702
 antisense lncRNA gene Chr5:80855442-80924503 (-)
CAST/EiJ MGP_CASTEiJ_G0003986
 antisense lncRNA gene Chr5:87871849-87951574 (-)
CBA/J MGP_CBAJ_G0004017
 antisense lncRNA gene Chr5:95453601-95537019 (-)
DBA/2J MGP_DBA2J_G0004032
 antisense lncRNA gene Chr5:85424386-85494268 (-)
FVB/NJ MGP_FVBNJ_G0004051
 antisense lncRNA gene Chr5:84331746-84402498 (-)
LP/J MGP_LPJ_G0004112
 antisense lncRNA gene Chr5:89292629-89367259 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004040
 antisense lncRNA gene Chr5:100551109-100669402 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004221
 antisense lncRNA gene Chr5:87644797-87715693 (-)
PWK/PhJ MGP_PWKPhJ_G0003939
 antisense lncRNA gene Chr5:84417519-84492422 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003884
 antisense lncRNA gene Chr5:87060504-87128650 (-)
WSB/EiJ MGP_WSBEiJ_G0004021
 antisense lncRNA gene Chr5:88030848-88107747 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving 1700066N21Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73471 NCBI Gene Model | MGI Sequence Detail 70764 C57BL/6J ±  kb
transcript NR_045924 RefSeq | MGI Sequence Detail 774 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 14
    Phenotypes 7
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory