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1700086O06Rik Gene Detail
Summary
  • Symbol
    1700086O06Rik
  • Name
    RIKEN cDNA 1700086O06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920766
    NCBI Gene: 73516
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:38371458-38383618 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 20.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    428 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920766
 lncRNA gene Chr18:38371429-38383689 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005785
 lincRNA gene Chr18:36672782-36689975 (-)
A/J MGP_AJ_G0005774
 lincRNA gene Chr18:35409698-35423330 (-)
AKR/J MGP_AKRJ_G0005751
 lincRNA gene Chr18:36373274-36385499 (-)
BALB/cJ MGP_BALBcJ_G0005753
 lincRNA gene Chr18:35475302-35488110 (-)
C3H/HeJ MGP_C3HHeJ_G0005701
 lincRNA gene Chr18:36445018-36458675 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005914
 lincRNA gene Chr18:37981025-37993636 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005257
 lincRNA gene Chr18:35429744-35441265 (-)
CAST/EiJ MGP_CASTEiJ_G0005643
 lincRNA gene Chr18:36400518-36412832 (-)
CBA/J MGP_CBAJ_G0005688
 lincRNA gene Chr18:39105315-39117597 (-)
DBA/2J MGP_DBA2J_G0005706
 lincRNA gene Chr18:35009169-35021499 (-)
FVB/NJ MGP_FVBNJ_G0005733
 lincRNA gene Chr18:34731334-34743574 (-)
LP/J MGP_LPJ_G0005787
 lincRNA gene Chr18:36739605-36751750 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005719
 lincRNA gene Chr18:40352554-40366117 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005913
 lincRNA gene Chr18:36247571-36259607 (-)
PWK/PhJ MGP_PWKPhJ_G0005587
 lincRNA gene Chr18:35235433-35247746 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005503
 lincRNA gene Chr18:36461906-36473217 (-)
WSB/EiJ MGP_WSBEiJ_G0005694
 lincRNA gene Chr18:36148037-36160761 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
  • All Sequences
    46
  • RefSeq
    3
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73516 NCBI Gene Model | MGI Sequence Detail 12161 C57BL/6J ±  kb
transcript NR_015475 RefSeq | MGI Sequence Detail 1564 C57BL/6  
polypeptide Q3V3J7 UniProt | EBI | MGI Sequence Detail 71 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory