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Ttll13 Gene Detail
Summary
  • Symbol
    Ttll13
  • Name
    tubulin tyrosine ligase-like family, member 13
  • Synonyms
    1700111A04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920845
    NCBI Gene: 269954
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:79896124-79910569 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 45.57 cM, cytoband D2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    374 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920845
 protein coding gene Chr7:79896101-79910569 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032406
 protein coding gene Chr7:82212233-82229068 (+)
A/J MGP_AJ_G0032385
 protein coding gene Chr7:80290365-80305277 (+)
AKR/J MGP_AKRJ_G0032321
 protein coding gene Chr7:82028283-82043169 (+)
BALB/cJ MGP_BALBcJ_G0032397
 protein coding gene Chr7:79967078-79981990 (+)
C3H/HeJ MGP_C3HHeJ_G0032110
 protein coding gene Chr7:82674793-82690450 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032889
 protein coding gene Chr7:85432931-85448775 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029897
 protein coding gene Chr7:82808186-82822993 (+)
CAST/EiJ MGP_CASTEiJ_G0031438
 protein coding gene Chr7:73558194-73575366 (+)
CBA/J MGP_CBAJ_G0032076
 protein coding gene Chr7:88285523-88299944 (+)
DBA/2J MGP_DBA2J_G0032231
 protein coding gene Chr7:78848477-78862883 (+)
FVB/NJ MGP_FVBNJ_G0032186
 protein coding gene Chr7:78761784-78776867 (+)
LP/J MGP_LPJ_G0032312
 protein coding gene Chr7:83449258-83465932 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032223
 protein coding gene Chr7:88441220-88456768 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032907
 protein coding gene Chr7:81460682-81475391 (+)
PWK/PhJ MGP_PWKPhJ_G0031158
 protein coding gene Chr7:72030910-72046475 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030999
 protein coding gene Chr7:68465354-68481535 (+)
WSB/EiJ MGP_WSBEiJ_G0031556
 protein coding gene Chr7:81815475-81830329 (+)



Homology
more
  • Human Ortholog
    TTLL13, tubulin tyrosine ligase like 13
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTLL13, tubulin tyrosine ligase like 13
  • Synonyms
    TTLL13P
  • Links
    NCBI Gene ID: 440307
    UniProt: A6NNM8

  • Chr Location
    15q26.1; chr15:90249530-90265482 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    15
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045467 Ensembl Gene Model | MGI Sequence Detail 14446 C57BL/6J ±  kb
transcript ENSMUST00000058266 Ensembl | MGI Sequence Detail 3010 Not Applicable  
polypeptide ENSMUSP00000062795 Ensembl | MGI Sequence Detail 804 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2670961
References
more
  • Summaries
    All 45
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 16
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:343289 Ho KH, et al., Choroid plexuses carry nodal-like cilia that undergo axoneme regression from early adult stage. Dev Cell. 2023 Dec 4;58(23):2641-2651.e6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory