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1810009J06Rik Gene Detail
Summary
  • Symbol
    1810009J06Rik
  • Name
    RIKEN cDNA 1810009J06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920876
    NCBI Gene: 73626
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:40941706-40945361 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 19.02 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920876
 protein coding gene Chr6:40941688-40945369 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0030594
 protein coding gene Chr6:37748522-37752441 (-)
AKR/J MGP_AKRJ_G0030521
 protein coding gene Chr6:38951845-38954785 (-)
BALB/cJ MGP_BALBcJ_G0030604
 protein coding gene Chr6:37959948-37963291 (-)
C3H/HeJ MGP_C3HHeJ_G0030317
 protein coding gene Chr6:38969200-38974592 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031058
 protein coding gene Chr6:40429816-40433605 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028270
 protein coding gene Chr6:35538492-35542403 (-)
CAST/EiJ MGP_CASTEiJ_G0029719
 protein coding gene Chr6:38858191-38862583 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0030439
 protein coding gene Chr6:37561567-37565757 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0030526
 protein coding gene Chr6:39486527-39490042 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030429
 protein coding gene Chr6:44330147-44334879 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031088
 protein coding gene Chr6:38909249-38910745 (-)
PWK/PhJ MGP_PWKPhJ_G0029433
 protein coding gene Chr6:37179004-37181335 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029269
 protein coding gene Chr6:38621317-38624943 (+)
WSB/EiJ MGP_WSBEiJ_G0029795
 protein coding gene Chr6:38856166-38860587 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73626 NCBI Gene Model | MGI Sequence Detail 3656 C57BL/6J ±  kb
transcript NM_023707 RefSeq | MGI Sequence Detail 856 C57BL/6  
polypeptide NP_076196 RefSeq | MGI Sequence Detail 247 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001314 Peptidase S1A, chymotrypsin family
    IPR009003 Peptidase S1, PA clan
    IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
    IPR050127 Serine Proteases (Peptidase S1 Family)
    IPR001254 Serine proteases, trypsin domain
    IPR018114 Serine proteases, trypsin family, histidine active site
    IPR033116 Serine proteases, trypsin family, serine active site
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:180225 Hayashi H, et al., Characterization of dsRNA-induced pancreatitis model reveals the regulatory role of IFN regulatory factor 2 (Irf2) in trypsinogen5 gene transcription. Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):18766-71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory