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Defb30 Gene Detail
Summary
  • Symbol
    Defb30
  • Name
    defensin beta 30
  • Synonyms
    2410125J01Rik, 4930449O14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920920
    NCBI Gene: 73670
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:63271536-63275313 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 33.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920920
 protein coding gene Chr14:63271536-63287409 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021454
 protein coding gene Chr14:57515921-57531841 (-)
A/J MGP_AJ_G0021413
 protein coding gene Chr14:56224599-56240616 (-)
AKR/J MGP_AKRJ_G0021389
 protein coding gene Chr14:58233082-58250311 (-)
BALB/cJ MGP_BALBcJ_G0021419
 protein coding gene Chr14:56180194-56196387 (-)
C3H/HeJ MGP_C3HHeJ_G0021196
 protein coding gene Chr14:57849436-57867031 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021858
 protein coding gene Chr14:60263899-60279777 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019398
 protein coding gene Chr14:54188165-54205554 (-)
CAST/EiJ MGP_CASTEiJ_G0020713
 protein coding gene Chr14:54300992-54316999 (-)
CBA/J MGP_CBAJ_G0021163
 protein coding gene Chr14:62047634-62063553 (-)
DBA/2J MGP_DBA2J_G0021286
 protein coding gene Chr14:55880114-55896021 (-)
FVB/NJ MGP_FVBNJ_G0021265
 protein coding gene Chr14:55300677-55320687 (-)
LP/J MGP_LPJ_G0021361
 protein coding gene Chr14:58545013-58560867 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021294
 protein coding gene Chr14:61325315-61341161 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021881
 protein coding gene Chr14:57375432-57391302 (-)
PWK/PhJ MGP_PWKPhJ_G0020457
 protein coding gene Chr14:52568215-52584807 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020290
 protein coding gene Chr14:53355947-53371776 (-)
WSB/EiJ MGP_WSBEiJ_G0020766
 protein coding gene Chr14:57694304-57710751 (-)



Homology
more
  • Human Ortholog
    DEFB135, defensin beta 135
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DEFB135, defensin beta 135
  • Synonyms
    DEFB136
  • Links
    NCBI Gene ID: 613209
    neXtProt AC: NX_Q30KP9
    UniProt: Q30KP9

  • Chr Location
    8p23.1; chr8:11982256-11984590 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73670 NCBI Gene Model | MGI Sequence Detail 3778 C57BL/6J ±  kb
transcript NM_001039566 RefSeq | MGI Sequence Detail 1020 C57BL/6  
polypeptide Q30KN4 UniProt | EBI | MGI Sequence Detail 75 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:1925380
References
more
  • Summaries
    All 30
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory