4930449I04Rik Gene Detail

Summary

• Symbol
  4930449I04Rik
• Name
  RIKEN cDNA 4930449I04 gene

• Feature Type
  protein coding gene
• IDs
  MGI:1921205
  NCBI Gene: 73955
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:46014984-46016106 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921205	protein coding gene	Chr5:46014984-46016106 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001487	unclassified gene	Chr5:44573446-44574568 (+)
A/J	MGP_AJ_G0001469	unclassified gene	Chr5:43064320-43065441 (+)
AKR/J	MGP_AKRJ_G0001455	unclassified gene	Chr5:44511555-44512676 (+)
BALB/cJ	MGP_BALBcJ_G0001465	unclassified gene	Chr5:43514740-43515864 (+)
C3H/HeJ	MGP_C3HHeJ_G0001442	unclassified gene	Chr5:44528467-44529588 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001582	unclassified gene	Chr5:46660523-46661645 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001275	unclassified gene	Chr5:40167253-40168516 (+)
CAST/EiJ	MGP_CASTEiJ_G0001417	unclassified gene	Chr5:43672607-43673742 (+)
CBA/J	MGP_CBAJ_G0001433	unclassified gene	Chr5:47955775-47956896 (+)
DBA/2J	MGP_DBA2J_G0001438	unclassified gene	Chr5:43098690-43099811 (+)
FVB/NJ	MGP_FVBNJ_G0001446	unclassified gene	Chr5:42524753-42525874 (+)
LP/J	MGP_LPJ_G0001492	unclassified gene	Chr5:45061900-45063022 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001432	unclassified gene	Chr5:48727987-48729108 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001570	unclassified gene	Chr5:44034681-44035805 (+)
PWK/PhJ	MGP_PWKPhJ_G0001374	unclassified gene	Chr5:42230377-42231496 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001344	unclassified gene	Chr5:43486301-43487422 (+)
WSB/EiJ	MGP_WSBEiJ_G0001435	unclassified gene	Chr5:44100436-44101557 (+)

Homology

• Gene Tree
  4930449I04Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  18 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Radiation induced
  2
• Spontaneous
  1
• Genomic Mutations
  5 involving 4930449I04Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000105459 (Evidence)
• NCBI Gene
  73955

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105459	Ensembl Gene Model | MGI Sequence Detail	1123	C57BL/6J
transcript	AK015432	GenBank | ENA | DDBJ | MGI Sequence Detail	1122	C57BL/6J
polypeptide	Q9CUM3	UniProt | EBI | MGI Sequence Detail	120	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 3

References

• Summaries
  All 27

  Diseases 1

  Phenotypes 18
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

TSS for 4930449I04Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46145	Chr5:46014431-46014462 (+)	-537 bp