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4933406D12Rik Gene Detail
Summary
  • Symbol
    4933406D12Rik
  • Name
    RIKEN cDNA 4933406D12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921315
    NCBI Gene: 74065
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:146384851-146388028 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 72.27 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    192 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921315
 lncRNA gene Chr2:146384851-146388028 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006031
 lincRNA gene Chr2:150739178-150742355 (+)
A/J MGP_AJ_G0006024
 lincRNA gene Chr2:144636443-144640401 (+)
AKR/J MGP_AKRJ_G0005998
 lincRNA gene Chr2:148845575-148848752 (+)
BALB/cJ MGP_BALBcJ_G0006001
 lincRNA gene Chr2:145067397-145070832 (+)
C3H/HeJ MGP_C3HHeJ_G0005950
 lincRNA gene Chr2:149320747-149324922 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006162
 lincRNA gene Chr2:155175545-155178722 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005885
 lincRNA gene Chr2:149678324-149681499 (+)
CBA/J MGP_CBAJ_G0005934
 lincRNA gene Chr2:160821560-160827785 (+)
DBA/2J MGP_DBA2J_G0005955
 lincRNA gene Chr2:143925265-143928442 (+)
FVB/NJ MGP_FVBNJ_G0005980
 lincRNA gene Chr2:142461013-142467924 (+)
LP/J MGP_LPJ_G0006036
 lincRNA gene Chr2:150921427-150924604 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005967
 lincRNA gene Chr2:165003431-165007676 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006161
 lincRNA gene Chr2:148826477-148829654 (+)
PWK/PhJ MGP_PWKPhJ_G0005833
 lincRNA gene Chr2:143607568-143610791 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005743
 lincRNA gene Chr2:147800405-147803565 (+)
WSB/EiJ MGP_WSBEiJ_G0005937
 lincRNA gene Chr2:149763812-149768035 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4933406D12Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 74065 NCBI Gene Model | MGI Sequence Detail 3178 C57BL/6J ±  kb
transcript NR_040502 RefSeq | MGI Sequence Detail 737 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory