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Krt80 Gene Detail
Summary
  • Symbol
    Krt80
  • Name
    keratin 80
  • Synonyms
    1200016G03Rik, 2310041I20Rik, Kb20
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921377
    NCBI Gene: 74127
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:101246196-101268043 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 56.78 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    537 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921377
 protein coding gene Chr15:101245325-101268043 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022370
 protein coding gene Chr15:103404759-103427084 (-)
A/J MGP_AJ_G0022332
 protein coding gene Chr15:99315928-99337138 (-)
AKR/J MGP_AKRJ_G0022308
 protein coding gene Chr15:102344711-102365153 (-)
BALB/cJ MGP_BALBcJ_G0022336
 protein coding gene Chr15:99417789-99438215 (-)
C3H/HeJ MGP_C3HHeJ_G0022106
 protein coding gene Chr15:102426666-102447202 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022784
 protein coding gene Chr15:107254280-107274841 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020309
 protein coding gene Chr15:95044724-95065711 (-)
CAST/EiJ MGP_CASTEiJ_G0021631
 protein coding gene Chr15:103280496-103302405 (-)
CBA/J MGP_CBAJ_G0022075
 protein coding gene Chr15:110981429-111001953 (-)
DBA/2J MGP_DBA2J_G0022202
 protein coding gene Chr15:98645962-98666851 (-)
FVB/NJ MGP_FVBNJ_G0022181
 protein coding gene Chr15:97698364-97718769 (-)
LP/J MGP_LPJ_G0022273
 protein coding gene Chr15:103547680-103569663 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022202
 protein coding gene Chr15:114659559-114681082 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022798
 protein coding gene Chr15:102375942-102396490 (-)
PWK/PhJ MGP_PWKPhJ_G0021370
 protein coding gene Chr15:98803594-98824169 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021202
 protein coding gene Chr15:102267007-102287608 (-)
WSB/EiJ MGP_WSBEiJ_G0021681
 protein coding gene Chr15:103007625-103028031 (-)



Homology
more
  • Human Ortholog
    KRT80, keratin 80
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRT80, keratin 80
  • Synonyms
    KB20
  • Links
    NCBI Gene ID: 144501
    neXtProt AC: NX_Q6KB66
    UniProt: Q6KB66

  • Chr Location
    12q13.13; chr12:52168996-52192014 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    25 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    741
  • Tissues
    7
  • cDNA Data
    23
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 74127 NCBI Gene Model | MGI Sequence Detail 21848 C57BL/6J ±  kb
    transcript NM_028770 RefSeq | MGI Sequence Detail 3067 C57BL/6  
    polypeptide Q0VBK2 UniProt | EBI | MGI Sequence Detail 452 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 23
      cDNA 23

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1917421
    References
    more
    • Summaries
      All 49
      Developmental Gene Expression 2
      Diseases 1
      Gene Ontology 3
      Phenotypes 25
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory