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1700092C17Rik Gene Detail
Summary
  • Symbol
    1700092C17Rik
  • Name
    RIKEN cDNA 1700092C17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921545
    NCBI Gene: 74295
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:22645996-22652285 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 15.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    381 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921545
 lncRNA gene Chr2:22645996-22652285 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005875
 lincRNA gene Chr2:20485065-20494006 (+)
A/J MGP_AJ_G0005868
 lincRNA gene Chr2:19650212-19656613 (+)
AKR/J MGP_AKRJ_G0005843
 lincRNA gene Chr2:20361599-20369192 (+)
BALB/cJ MGP_BALBcJ_G0005847
 lincRNA gene Chr2:19764771-19770573 (+)
C3H/HeJ MGP_C3HHeJ_G0005794
 lincRNA gene Chr2:20263676-20271022 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006007
 lincRNA gene Chr2:21081580-21091701 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005342
 lincRNA gene Chr2:18748898-18756243 (+)
CAST/EiJ MGP_CASTEiJ_G0005730
 lincRNA gene Chr2:20176913-20184556 (+)
CBA/J MGP_CBAJ_G0005779
 lincRNA gene Chr2:21879180-21891418 (+)
DBA/2J MGP_DBA2J_G0005800
 lincRNA gene Chr2:19552121-19558351 (+)
FVB/NJ MGP_FVBNJ_G0005826
 lincRNA gene Chr2:19339379-19345637 (+)
LP/J MGP_LPJ_G0005879
 lincRNA gene Chr2:20422315-20430289 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005813
 lincRNA gene Chr2:21927437-21933325 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006004
 lincRNA gene Chr2:20234257-20241732 (+)
PWK/PhJ MGP_PWKPhJ_G0005679
 lincRNA gene Chr2:19367121-19373643 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005591
 lincRNA gene Chr2:20360411-20366430 (+)
WSB/EiJ MGP_WSBEiJ_G0005783
 lincRNA gene Chr2:20382991-20391925 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085353 Ensembl Gene Model | MGI Sequence Detail 6290 C57BL/6J ±  kb
transcript ENSMUST00000135792 Ensembl | MGI Sequence Detail 424 Not Applicable  
polypeptide Q8C1Q9 UniProt | EBI | MGI Sequence Detail 89 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038124 Beta-retroviral matrix superfamily
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory