1700108N11Rik MGI Mouse Gene Detail - MGI:1921551

Sequence Map

Chr2:144173379-144174559 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921551	lncRNA gene	Chr2:144173379-144174559 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003656	antisense lncRNA gene	Chr2:148415224-148416406 (+)
A/J	MGP_AJ_G0003638	antisense lncRNA gene	Chr2:142406258-142407438 (+)
AKR/J	MGP_AKRJ_G0003616	antisense lncRNA gene	Chr2:146497268-146498448 (+)
BALB/cJ	MGP_BALBcJ_G0003627	antisense lncRNA gene	Chr2:142853366-142854546 (+)
C3H/HeJ	MGP_C3HHeJ_G0003574	antisense lncRNA gene	Chr2:147040411-147041591 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003766	antisense lncRNA gene	Chr2:152872694-152873874 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003273	antisense lncRNA gene	Chr2:136587708-136588890 (+)
CAST/EiJ	MGP_CASTEiJ_G0003537	antisense lncRNA gene	Chr2:147374783-147375964 (+)
CBA/J	MGP_CBAJ_G0003571	antisense lncRNA gene	Chr2:158445261-158446441 (+)
DBA/2J	MGP_DBA2J_G0003578	antisense lncRNA gene	Chr2:141693778-141694960 (+)
FVB/NJ	MGP_FVBNJ_G0003599	antisense lncRNA gene	Chr2:140279754-140280935 (+)
LP/J	MGP_LPJ_G0003656	antisense lncRNA gene	Chr2:148570780-148571962 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003587	antisense lncRNA gene	Chr2:162637888-162639068 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003766	antisense lncRNA gene	Chr2:146494137-146495319 (+)
PWK/PhJ	MGP_PWKPhJ_G0003492	antisense lncRNA gene	Chr2:141350424-141351702 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003435	antisense lncRNA gene	Chr2:145538661-145539840 (+)
WSB/EiJ	MGP_WSBEiJ_G0003571	antisense lncRNA gene	Chr2:147510764-147511945 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000084837	Ensembl Gene Model \| MGI Sequence Detail	1181	C57BL/6J	± kb
	transcript	ENSMUST00000153051	Ensembl \| MGI Sequence Detail	917	Not Applicable

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Summaries

All 10

Phenotypes 3
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700108N11Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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