About   Help   FAQ
Tex54 Gene Detail
Summary
  • Symbol
    Tex54
  • Name
    testis expressed 54
  • Synonyms
    1700092M07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921557
    NCBI Gene: 74307
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8718082-8718589 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921557
 protein coding gene Chr19:8718082-8718589 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024805
 protein coding gene Chr19:6012718-6013225 (+)
A/J MGP_AJ_G0024773
 protein coding gene Chr19:5692696-5693203 (+)
AKR/J MGP_AKRJ_G0024748
 protein coding gene Chr19:5781027-5781534 (+)
BALB/cJ MGP_BALBcJ_G0024773
 protein coding gene Chr19:5795466-5795973 (+)
C3H/HeJ MGP_C3HHeJ_G0024539
 protein coding gene Chr19:5861838-5862345 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025220
 protein coding gene Chr19:6132234-6132741 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022649
 protein coding gene Chr19:5933977-5934485 (+)
CAST/EiJ MGP_CASTEiJ_G0024012
 protein coding gene Chr19:5509084-5509592 (+)
CBA/J MGP_CBAJ_G0024513
 protein coding gene Chr19:6247533-6248041 (+)
DBA/2J MGP_DBA2J_G0024640
 protein coding gene Chr19:5522933-5523441 (+)
FVB/NJ MGP_FVBNJ_G0024607
 protein coding gene Chr19:5598579-5599086 (+)
LP/J MGP_LPJ_G0024727
 protein coding gene Chr19:5901111-5901618 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024634
 protein coding gene Chr19:6117683-6118190 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025269
 protein coding gene Chr19:5825837-5826344 (+)
PWK/PhJ MGP_PWKPhJ_G0023757
 protein coding gene Chr19:5188242-5188750 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023562
 protein coding gene Chr19:5422836-5423344 (+)
WSB/EiJ MGP_WSBEiJ_G0024074
 protein coding gene Chr19:5790161-5790668 (+)



Homology
more
  • Human Ortholog
    TEX54, testis expressed 54
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEX54, testis expressed 54
  • Links
    NCBI Gene ID: 111216277
    UniProt: A0A1B0GVG6

  • Chr Location
    11q12.3; chr11:62832321-62832841 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74307 NCBI Gene Model | MGI Sequence Detail 508 C57BL/6J ±  kb
transcript NM_001177347 RefSeq | MGI Sequence Detail 380 C57BL/6  
polypeptide G3UW99 UniProt | EBI | MGI Sequence Detail 86 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
Other
Accession IDs
less
MGI:7316762
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:97250 Hong S, et al., Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. J Biol Chem. 2005 Mar 4;280(9):7685-93
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory