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Gsdmcl-ps Pseudogene Detail
Summary
  • Symbol
    Gsdmcl-ps
  • Name
    gasdermin C-like, pseudogene
  • Synonyms
    4933426G20Rik
  • Feature Type
    pseudogene
  • IDs
    MGI:1921710
    NCBI Gene: 74460
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr15:63787629-63797515 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 28.13 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    235 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921710
 pseudogene Chr15:63786310-63797515 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039863
 pseudogene Chr15:63261969-63382635 (+)
A/J MGP_AJ_G0039869
 pseudogene Chr15:60775782-60926529 (+)
AKR/J MGP_AKRJ_G0039793
 pseudogene Chr15:62478389-62623817 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040412
 pseudogene Chr15:65726495-65821538 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037008
 pseudogene Chr15:57764703-57839385 (+)
CAST/EiJ MGP_CASTEiJ_G0038598
 pseudogene Chr15:63426131-63427681 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0039664
 pseudogene Chr15:60746721-60760521 (+)
FVB/NJ MGP_FVBNJ_G0039622
 pseudogene Chr15:59677226-59795867 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0039619
 pseudogene Chr15:72956181-73066529 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040512
 pseudogene Chr15:62911854-63036250 (+)
PWK/PhJ MGP_PWKPhJ_G0038271
 pseudogene Chr15:60831781-60856926 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038015
 pseudogene Chr15:62819793-62855458 (+)
WSB/EiJ MGP_WSBEiJ_G0038829
 pseudogene Chr15:62999493-63000999 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    3
  • Radiation induced
    2
  • Transposon induced
    5
  • Genomic Mutations
    10 involving Gsdmcl-ps
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000100127 Ensembl Gene Model | MGI Sequence Detail 9887 C57BL/6J ±  kb
transcript ENSMUST00000188367 Ensembl | MGI Sequence Detail 1375 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 35
    Diseases 1
    Phenotypes 24
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory