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Stpg3 Gene Detail
Summary
  • Symbol
    Stpg3
  • Name
    sperm tail PG rich repeat containing 3
  • Synonyms
    4933433C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921722
    NCBI Gene: 74472
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25102219-25104649 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 17.07 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921722
 protein coding gene Chr2:25102219-25108680 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025424
 protein coding gene Chr2:23075501-23077931 (-)
A/J MGP_AJ_G0025401
 protein coding gene Chr2:22177053-22179483 (-)
AKR/J MGP_AKRJ_G0025371
 protein coding gene Chr2:22931594-22934024 (-)
BALB/cJ MGP_BALBcJ_G0025397
 protein coding gene Chr2:22299793-22302223 (-)
C3H/HeJ MGP_C3HHeJ_G0025158
 protein coding gene Chr2:22860759-22863189 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025841
 protein coding gene Chr2:23809318-23811748 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023252
 protein coding gene Chr2:21109399-21111856 (-)
CAST/EiJ MGP_CASTEiJ_G0024621
 protein coding gene Chr2:22744431-22746874 (-)
CBA/J MGP_CBAJ_G0025136
 protein coding gene Chr2:24645246-24647676 (-)
DBA/2J MGP_DBA2J_G0025269
 protein coding gene Chr2:22033388-22035818 (-)
FVB/NJ MGP_FVBNJ_G0025231
 protein coding gene Chr2:21772996-21775426 (-)
LP/J MGP_LPJ_G0025355
 protein coding gene Chr2:23022386-23024816 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025262
 protein coding gene Chr2:24850144-24852574 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025900
 protein coding gene Chr2:22877837-22880267 (-)
PWK/PhJ MGP_PWKPhJ_G0024369
 protein coding gene Chr2:21844531-21846975 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024169
 protein coding gene Chr2:23033566-23036020 (-)
WSB/EiJ MGP_WSBEiJ_G0024690
 protein coding gene Chr2:22950332-22952762 (-)



Homology
more
  • Human Ortholog
    STPG3, sperm-tail PG-rich repeat containing 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STPG3, sperm-tail PG-rich repeat containing 3
  • Synonyms
    C9orf173
  • Links
    NCBI Gene ID: 441476
    neXtProt AC: NX_Q8N7X2
    UniProt: Q8N7X2

  • Chr Location
    9q34.3; chr9:137251261-137253483 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Male mice exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036770 Ensembl Gene Model | MGI Sequence Detail 2431 C57BL/6J ±  kb
    transcript ENSMUST00000043774 Ensembl | MGI Sequence Detail 1430 Not Applicable  
    polypeptide ENSMUSP00000037603 Ensembl | MGI Sequence Detail 306 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 9
      cDNA 9

      Microarray probesets 1
    References
    more
    • Summaries
      All 23
      Gene Ontology 1
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:296968 Park S, et al., CRISPR/Cas9-mediated genome-edited mice reveal 10 testis-enriched genes are dispensable for male fecundity. Biol Reprod. 2020 Aug 4;103(2):195-204
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory